Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1069 ATGGAGGAACATCAAAACCTTGAAAGCTTCTTAACATGGGCAGCAAAACTTGGAATATCAGACTCAACAACCACCAACCACCCTCAACATTCTCTTTCTTCTTCTCTCTCTCTTTCTAATTTTCCTCACTCTGGCGGAAGAGGTTTGGGTGCTGTGAGAGACCTTAAGAGGGGAGAATTGATTCTAAAGGTTCCAAAATCAGCTTTAATGACAAGAGACAGTGTTATGGAAGATAAAAAACTCTGCTTTTCTGTTAATAACCACTCTTCTCTCTCCCCAACCCAGATATTGGCTGTGTGCTTGTTGTATGAAATGGGTAAAGGAAAGACTTCAAGGTGGCATCCTTACCTCATGCATTTGCCACAGAGTTATGACATACTAGCAATGTTTGGTGAATTTGAGAAACATGCTCTGCAAGTAGATGAGGCTGTGTGGGTCACAGAAAAGGCTGTACTGAAAGCCAAATCAGAGTGGAAAGAAGCTCAAGCTTTGATGGAAGAACTCAAGCTTAAGCCCCGACTATTAACATTTAAGGCTTGGGTTTGGGCTGCTGCAACGATATCTTCCCGGACATTGCATGTACCATGGGATGAAGCTGGGTGTTTATGCCCCGTGGGGGACTTGTTTAACTATGATGCACCTGGGGACGAGCCATGTAGCATTGGGGATGGTGAGGATTTACTATCTAACTCTTCCGTCCATGTTACTGACTTGTCAAATGGAGGCAATACTATGCTGGTAGATTCGGAACAGCTTGATTCTCATTCTCAGAGATTAACTGACGGCGGGTTTGAGGAAGATGCTAATGCATATTGCTTTTATGCTAGGGCAAATTACAAGAAAGGAGACCAGGTTCTATTATGTTATGGAACTTACACCAATTTGGAGCTTCTTGAACACTACGGGTTTCTACTGCATGAAAATCCAAATGACAAAGTTTTCATTCCTTTAGAACCTGCTGTATATTCTTCCAGTTCTTGGTCTAAGGAATCGCTCTATATCCATCATAACGGTAGGCCTTCATTTGCACTACTAGCTGCATTGCGGTTGTGGGCAACCCCTCAAAATAAAAGGAGGTCTGTTGGACATCTTGCATATGCTGGTTCTCAACTCTCTCCCGAAAACGAAATTTTTATCATGAAACAGCTTTCCAAAATTTGCCATGCTGTCTTGCATAACATGCCGACATGTATTGATGATGACAACTTGCTTCTGAATGCAATAGATTGTCAAGATTTTTATACTTTCATGGACTTCACGAAATTAATGTCTTCCAAAGATGAGATTTATACCTTCTTAGAAGCTCATAATATGAAGGATGCTCACAGTTTTACTGATAAAATTTTATCTAAAAATACAAGAAGATGCATGGATAGGTGGAAATGGGCTATACAATGGAGGGTGAGGTATAAGAAAGTCCTTGTCAATTGTATTTCTTATTGCAATGAAATACTGGATTCTTTCATGAAGTAA 1473 0.406 MEEHQNLESFLTWAAKLGISDSTTTNHPQHSLSSSLSLSNFPHSGGRGLGAVRDLKRGELILKVPKSALMTRDSVMEDKKLCFSVNNHSSLSPTQILAVCLLYEMGKGKTSRWHPYLMHLPQSYDILAMFGEFEKHALQVDEAVWVTEKAVLKAKSEWKEAQALMEELKLKPRLLTFKAWVWAAATISSRTLHVPWDEAGCLCPVGDLFNYDAPGDEPCSIGDGEDLLSNSSVHVTDLSNGGNTMLVDSEQLDSHSQRLTDGGFEEDANAYCFYARANYKKGDQVLLCYGTYTNLELLEHYGFLLHENPNDKVFIPLEPAVYSSSSWSKESLYIHHNGRPSFALLAALRLWATPQNKRRSVGHLAYAGSQLSPENEIFIMKQLSKICHAVLHNMPTCIDDDNLLLNAIDCQDFYTFMDFTKLMSSKDEIYTFLEAHNMKDAHSFTDKILSKNTRRCMDRWKWAIQWRVRYKKVLVNCISYCNEILDSFMK* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1069 490 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 3 475 - -
Lan2g1069 490 CDD SET_LSMT 45 304 - -
Lan2g1069 490 Gene3D - 321 489 IPR036464 -
Lan2g1069 490 PANTHER PROTEIN SET DOMAIN GROUP 40 3 475 - -
Lan2g1069 490 ProSiteProfiles SET domain profile. 34 290 IPR001214 GO:0005515
Lan2g1069 490 Pfam SET domain 46 290 IPR001214 GO:0005515
Lan2g1069 490 Gene3D set domain protein methyltransferase, domain 1 3 304 - -
Lan2g1069 490 SUPERFAMILY SET domain 5 308 IPR046341 -
Lan2g1069 490 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 300 412 IPR036464 -
Lan2g1069 490 Coils Coil 151 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1069 Lan-Chr2 21955826 21958830 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lan2g1069 SET 9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1069 - - gmx:100787452 785.793