Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1063 ATGAATCTTTCAACATCAGGGTTGGGTCAGCAGGGACATGAAGGAGGGGAGAAGAAGTGTTTAAATTCTGAGCTATGGCATGCATGTGCGGGTCCATTGGTGTCCCTACCAACTGCAGGGACTCGTGTGGTTTACTTCCCTCAGGGTCATAGTGAGCAGGTGTCTGCCACGACTAACAAAGAAATTGATGGGCACATACCCAATTATCCAAGCTTGCCACCTCAACTGATTTGCCAGCTTCACAATCTTACGATGCATGCAGATGTTGAAACTGATGAAGTGTATGCTCAAATGACGCTGCAGCCATTGACTCCGCAAGAGCAGAAGGATACATTTCTTCCTATGGAGTTGGGCATTCCAAGTAAGCAGCCTTCAAATTATTTTTGCAAGACATTAACCGCAAGTGACACCAGCACACATGGAGGATTCTCTGTTCCCCGTCGTGCGGCTGAAAAAGTTTTCCCTCCACTGGATTTCTCACTGCAACCACCTGCACAAGAACTAATTGCCAGGGATCTCCATGATGTCGAGTGGAAATTTCGGCATATTTTTCGGGGGCAGCCAAAACGCCACCTTCTTACAACAGGATGGAGTGTATTTGTTAGTGCCAAAAGACTTGTGGCTGGAGATTCTGTACTTTTCATATGGAATGAAAAAAATCAGCTTTTTTTGGGAATACGGCATGCCAATCGGTCACAAACTGTAATGCCATCGTCAGTTCTATCCAGTGATAGTATGCACATCGGGCTTCTTGCAGCCGCTGCCCATGCTGCAGCAACTAATAGCTGTTTTACGGTGTTCTACAATCCAAGGGCTAGCCCATCTGAGTTTGTCATACCACTATCAAAATATATCAAAGCTGTGTACCATACACGTGTTTCTGTTGGTATGCGTTTCAGGATGCTTTTTGAGATTGAAGAGTCAAGTGTCCGTAGGTACATGGGTACAGTAACTGGCATAAGTGACTTGGATCCTGTTCGTTGGCCGAATTCTCATTGGCGATCAGTCAAGGTCGGTTGGGATGAATCAACAGCAGGAGAGAAGCAGCCACATGTATCATTATGGGAAATTGAGCCTTTAACAACATTCCCAATGTATCCATCACTATATCCCCTCAGATTGAAACGTGCATGGCATCCCGGCACCTCATCTTTTCTCGATGGCAGAGATAACACAACTAATGGGCTAATGTGGCTTAGAGGTGGACCTGGAGACCAAGGTGTTGGTTTGTTGCCCTGGATGCAGCAGAGATTGGATCCAACTTTGATTAGAAATGATCAAAATCAGCAGTATCAAGCCATGTTGGCAACAGCCGGTTCGCAGAACATAGGTAGTGGAGATCTCTTGAGGCATCCAATGATGAATTTTCAACAGCCTTTCTATCTTCAACAATTTGGAAACTCCAATCCTCCTTTGCATCTTCTGCAGCAACAAGCTATTCAGCAATCAGTGTCTCATAATATTCTGCAACCAGAAGCCCAACTATTGACAGAGAACCTGTCTCAGCAGTTCCTTCAGAAACCACCTATCAAACGTGAAGACCAGGCGCAGAAGCAGCAACACACTTATCATAATTTGCATTTAATTCAAACTGATCAGCTCCATCACTCTAATATGCCTTCACCATCATATTCAAAACAAGGTTTCTTAGATTCAAACATGAAGTTCTCTCCGTCAGTCTCGTCAGGACAAAACATGCTTGGTTCACTTTGTCCTGAAGGGAGTGGTAATCTCTTGTATTTATCCAAAAGTGGCCCGACCATGCTGACTGAACAACAGTTACACCAACAATCATGGGCCCCTAAGTATTTATCTCTGCAGGTCAATGACTTCGGCAACTCAGTGTCACATGGACAATATTCTGGAAAAGATACTACAATGGTGTCACCACATTGTAACTCAGATACCCAAAATCCTACTCTCTTTGGTGTCAATATTGATTCATCTGGCCTTCTTCCCACCACTGTTCCTCATTATACTAATTCATCAGCTAATACTGATTCACTAACAATGCCATTAGAGGAATCTGGATTCAAAGGTTCTCTATATGGTTGTGTGCAAGACTCGTCAGAGTTGTTTCGAAGTGCAGGGCAAGTTGACCCTCAAAACCAGACACATACATTTGTCAAGGTTTACAAATCAGGATCAGTTGGGCGTTCACTCGACATCTCTCGGTTCAGCAGCTATCATGAGCTACGAGAGGAGTTGGGTCAGATGTTTGCGGTTGAGGGGAAATTAGAAGACCCTCTTAGATCAGGCTGGCAGCTTTTATTCGTCGACAGGGAGAATGATGTTCTTCTCCTTGGAGACGACCCGTGGGAATCATTTGTCAATAATGTTTGGTATATCAAAATACTGTCCCCCGGAGATATTCGGACAATGGAAGAGCAAGCCGAGGAATCCCTTGGTCCAAGTTCAGGACAAAGGATGAATAGCAGTGGTGCAGATTATCAGGACAATGTTTCTGGACTACCATCAATAGGCTCTCTTGAATACTGA 2499 0.4446 MNLSTSGLGQQGHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNKEIDGHIPNYPSLPPQLICQLHNLTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGIPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLFLGIRHANRSQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFEIEESSVRRYMGTVTGISDLDPVRWPNSHWRSVKVGWDESTAGEKQPHVSLWEIEPLTTFPMYPSLYPLRLKRAWHPGTSSFLDGRDNTTNGLMWLRGGPGDQGVGLLPWMQQRLDPTLIRNDQNQQYQAMLATAGSQNIGSGDLLRHPMMNFQQPFYLQQFGNSNPPLHLLQQQAIQQSVSHNILQPEAQLLTENLSQQFLQKPPIKREDQAQKQQHTYHNLHLIQTDQLHHSNMPSPSYSKQGFLDSNMKFSPSVSSGQNMLGSLCPEGSGNLLYLSKSGPTMLTEQQLHQQSWAPKYLSLQVNDFGNSVSHGQYSGKDTTMVSPHCNSDTQNPTLFGVNIDSSGLLPTTVPHYTNSSANTDSLTMPLEESGFKGSLYGCVQDSSELFRSAGQVDPQNQTHTFVKVYKSGSVGRSLDISRFSSYHELREELGQMFAVEGKLEDPLRSGWQLLFVDRENDVLLLGDDPWESFVNNVWYIKILSPGDIRTMEEQAEESLGPSSGQRMNSSGADYQDNVSGLPSIGSLEY* 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1063 832 ProSiteProfiles PB1 domain profile. 706 790 IPR000270 GO:0005515
Lan2g1063 832 Gene3D - 702 795 - -
Lan2g1063 832 ProSiteProfiles B3 DNA-binding domain profile. 128 230 IPR003340 GO:0003677
Lan2g1063 832 MobiDBLite consensus disorder prediction 799 825 - -
Lan2g1063 832 Pfam AUX/IAA family 703 789 IPR033389 -
Lan2g1063 832 SUPERFAMILY DNA-binding pseudobarrel domain 112 257 IPR015300 -
Lan2g1063 832 Gene3D - 292 364 - -
Lan2g1063 832 SUPERFAMILY CAD & PB1 domains 703 780 - -
Lan2g1063 832 Pfam B3 DNA binding domain 128 229 IPR003340 GO:0003677
Lan2g1063 832 PANTHER AUXIN RESPONSE FACTOR 1 817 - -
Lan2g1063 832 Gene3D - 126 229 IPR015300 -
Lan2g1063 832 CDD B3_DNA 127 223 IPR003340 GO:0003677
Lan2g1063 832 MobiDBLite consensus disorder prediction 795 832 - -
Lan2g1063 832 Pfam Auxin response factor 254 337 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lan2g1063 832 SMART B3_2 128 230 IPR003340 GO:0003677
Lan2g1063 832 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 817 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1063 Lan-Chr2 21901469 21928343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1063 98 803 B3 DNA Binding Superfamily AT5G37020 65.659 0.0 875
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lan2g1063 AUX_IAA 4.1e-07 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1063 - - gmx:100780393 1420.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1063 2 21901469 21928343 Lan9g1258 9 19844886 19859461 LSH
Lan2g1063 2 21901469 21928343 Lan9g1257 9 19820048 19828455 LSH
Lan2g1063 2 21901469 21928343 Lan2g1063 2 21901469 21928343 PCT
Lan2g1063 2 21901469 21928343 Lan9g1257 9 19820048 19828455 PCT
Lan9g1258 9 19844886 19859461 Lan2g1063 2 21901469 21928343 PCT
Lan2g1063 2 21901469 21928343 Lan9g1258 9 19844886 19859461 PCT
Lan9g1257 9 19820048 19828455 Lan2g1063 2 21901469 21928343 PCT