Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1058 ATGCTCGCTGTTGCAGCTTCTGCTTCTAGACACATTCTTCAACGCGATGCTAGACCCACCATTAGTTTTGGAGGTTCTAGTGGCTGTGGCATTCAAATTCGATATCTTTTAAGCGTTTCTGGTATAACCAGATTCTCAAATCACACTAGAATCGATAGAGGTTACAGTTTTGGAGTTAGCCTTATTCAGCAACAACGTAGAACATGCCCAAGTTTGATTTTTTCCATAAAGGGGTTCCTCTCTGATTCATTTTCTTCTCCTTTACATGGCAGAGTAACAAGACCTTATCTACAACAATCCAATTCAACGCTAGGTGGAAGAGCATTGTTCTCAACTTCAACTAAAGCTGACGATGGATCTGCATCAAAGAAAACTAGTGCTTCCACCATTGCTAAGTCACCACAAGGAGAAAATATTGCTGATATGAAGATCCTTCGTACTCTTGCCAGTTATATTTGGATGAAAGACAATCTTGAGTTTCGATTTCGGGTTATTGCTGCACTGAGTTTTCTTGTTGGTGCTAAGGTTCTGAATGTTCAGGTGCCTTTTATGTTCAAGCTTGCAGTTGATTGGTTGACGTCTGCCACGGGCAATACTGGTGATCTTGCTTCTTTTACGGCTGCAAATTCGACTGCGGTGGCTCTTTTTGCAACCCCAGTGGCGGTGTTGATTGGATATGGGATTGCACGCACGGGAGCTTCGGCTTTCAATGAACTGCGGACTGCTGTATTCTCTAAGGTAGCATTGCGAACAATTCGATTAGTGTCAAGGAAGGTTTTCTCACATTTGCATGACCTTGACCTTCGATATCATCTAAGCCGAGAAACTGGCGCATTAAGTAGAACAGTTGATCGTGGTAGCCATGCAATAAATTTCCTTCTATCAGCTATGGTGTTGAATGTAGTACCCACAATATTAGAGATATCTATGGTATCAGGTATACTGGCCTACAATTTTGGAGCTCCTTTTGCATGGATTACGTCCTTATCAGTTGCAGCTTATGTTATTTTCACACTGACTATCACACAGTGGAGGACTAAGTTCAGGAGAGACATGAATAAGGCTGATAATGATGCTAGCACAAGAGCTATTGATTCACTTATTAATTATGAGACTGTCAAATATTTCAATAATGAAGATTATGAAGCTGGAAAATATGACGAATACCTAAAGAAGTACGAAGATGCTTCTCTGAAAACACAAGAGAGTCTTGCTTTCTTGAACTTTGGTCAAAATGTTATCTTTAGTACTGCACTTTCCACATCAATGGTGCTATGTTCTCATGGAATCATGAGTGGCACAATGACTGTTGGTGATTTGGTGATGGTGAATGGGCTTCTCTTCCAACTATCTCTTCCACTGAACTTCCTAGGTGGTGTTTATCGTGAGACTATACAGAGTCTAGTTGACATGAAGTCCTTGTTTCGGTTACTTGAGGAAAGAGCAGATATTAAGGATAAAGATGATGCAAAGCCTCTGAGCTTTAATGGAGGGAGCATCCAATTTGAGAATGTACATTTCAGTTATCTCACAGAAAGGAAGATACTAGATGGAATATCGCTTGTTATGCCGGCTGGTAAAAGTGTGGCAATTGTTGGGACTAGTGGAAGTGGAAAATCAACCATTCTTAGATTGCTATTCAGGTTTTTTGATCCTCACTCTGGAAGTATAAAGATAGATGGTCAGGATATTCGGGAGGTAACCCTTCAGAGTTTGCGGAAGTCTATTGGTGTTGTTCCTCAAGATACTGTACTTTTCAATGATACAATATTTCATAACATTCACTATGGTCGACTTTCAGCAACAAAAGAGGAGGTTTATGAAGCTGCTCAGCATGCAGCTATTCATGAAACTATCATGAATTTTCCTGATAAATATTCAACTGTTGTGGGAGAGCGAGGGCTCAAGTTAAGTGGCGGTGAGAAGCAACGTGTTGCCCTAGCTCGTGCATTCTTGAAAGCACCTGCAATATTGTTGTGTGATGAAGCTACAAGTGCTCTCGACAGCACAACAGAAGCAGAGATTTTAAGTGCGTTTAAGTCACTCGCAAATAATCGAACTTCCATATTCATTGCTCACAGGCTTACCACCGCAATGCAGTGTGATGAGATCATAGTTTTGGAGAATGGAAAGGTGATTGAGCAAGGACCCCATGAAGTGCTCTTATCAAATGGGGGAAGGTATGCACAGCTTTGGGGACAGCAAAATAACACAGAAGATGCAATTGATACAACTATCAAACTTGGGGCATAA 2253 0.4106 MLAVAASASRHILQRDARPTISFGGSSGCGIQIRYLLSVSGITRFSNHTRIDRGYSFGVSLIQQQRRTCPSLIFSIKGFLSDSFSSPLHGRVTRPYLQQSNSTLGGRALFSTSTKADDGSASKKTSASTIAKSPQGENIADMKILRTLASYIWMKDNLEFRFRVIAALSFLVGAKVLNVQVPFMFKLAVDWLTSATGNTGDLASFTAANSTAVALFATPVAVLIGYGIARTGASAFNELRTAVFSKVALRTIRLVSRKVFSHLHDLDLRYHLSRETGALSRTVDRGSHAINFLLSAMVLNVVPTILEISMVSGILAYNFGAPFAWITSLSVAAYVIFTLTITQWRTKFRRDMNKADNDASTRAIDSLINYETVKYFNNEDYEAGKYDEYLKKYEDASLKTQESLAFLNFGQNVIFSTALSTSMVLCSHGIMSGTMTVGDLVMVNGLLFQLSLPLNFLGGVYRETIQSLVDMKSLFRLLEERADIKDKDDAKPLSFNGGSIQFENVHFSYLTERKILDGISLVMPAGKSVAIVGTSGSGKSTILRLLFRFFDPHSGSIKIDGQDIREVTLQSLRKSIGVVPQDTVLFNDTIFHNIHYGRLSATKEEVYEAAQHAAIHETIMNFPDKYSTVVGERGLKLSGGEKQRVALARAFLKAPAILLCDEATSALDSTTEAEILSAFKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGPHEVLLSNGGRYAQLWGQQNNTEDAIDTTIKLGA* 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1058 750 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 500 734 IPR003439 GO:0005524
Lan2g1058 750 SUPERFAMILY ABC transporter transmembrane region 159 480 IPR036640 GO:0005524|GO:0016021
Lan2g1058 750 CDD ABCC_ATM1_transporter 500 735 - -
Lan2g1058 750 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 489 735 IPR027417 -
Lan2g1058 750 Pfam ABC transporter 516 665 IPR003439 GO:0005524
Lan2g1058 750 SMART AAA_5 525 711 IPR003593 -
Lan2g1058 750 Pfam ABC transporter transmembrane region 165 453 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan2g1058 750 PANTHER BNAA10G12020D PROTEIN 66 740 - -
Lan2g1058 750 ProSitePatterns ABC transporters family signature. 637 651 IPR017871 GO:0005524
Lan2g1058 750 CDD ABC_6TM_ATM1_ABCB7 167 474 - -
Lan2g1058 750 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 66 740 IPR039421 -
Lan2g1058 750 Gene3D ABC transporter type 1, transmembrane domain 151 490 IPR036640 GO:0005524|GO:0016021
Lan2g1058 750 Gene3D - 492 747 IPR027417 -
Lan2g1058 750 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 165 466 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1058 Lan-Chr2 21866774 21877575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1058 336 740 Calmodulin-binding Proteins AT2G36910 36.058 1.17e-64 232
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1058 2 21866774 21877575 Lan2g1058 2 21866774 21877575 ECH
Lan2g1058 2 21866774 21877575 Lan9g1250 9 19767110 19780044 LSH