Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1054 ATGGCAGAGGTTACCTCGACTTCATTTCTCAATATCTTATACCTTCCAGCAAAAGCACACGCCATGAAGTTATATTGCCCTGAAATGCATCATTTCCTTTTTATTATTGTTATTCTTTTTCCTCTGGTTATAGCTGATCATGGTTCGGATAAGCAAGCCCTTCTTGATTTTGCTGCTGCTGTCCCCCATCATCGAAACCTTAAGTGGAATCCAGCTACCTCAATCTGTACTTCTTGGGAAGGCATCACTTGTGATCCAGATGGAAATCGTGTTGTTTCTGTCCGGCTCCCTGGAATTGGACTAGTGGGCACCATACCCGCCAATACACTCGGAAAACTTGATGCACTAAAAAACATCAGTCTTCGCTCCAACCTACTCAGTGGAACTCTGCCTACTGATATTACTTCTCTTCATTCTCTCCAATATCTCTATCTTCAGCGTAATAACCTTTCTGGTGATATACCATCCTCATTGCCATCCCAACTCGTTGTACTCGATTTGTCTTACAATTCCTTCACTGGTAGCATTCCGAAGACATTACAGAATTTGACACAACTAACTAGACTGAACCTCCAAACCAACTCCCTATCAGGACAGATACCTAATCTCAATGTCACTAAACTCAGACACTTGAATTTAAGCAACAACCATTTGAATGGCTCTATCCCTGAAGCTCTTCAGATTTTTCCGAACTCTTCATTTGAAGGGAACTCTCTCTTATGTGGATTGCCATTAAAGTCATGCTCTCTAGTACCCCAAACACCTTCTCCTCCCACGTTTACTCCAACTGCACCATCACCACCTGCAAAACAAAGATCCAAAAATAAACTGAGTAAGGCTGCTATCATTGCAATTGCGGTCGGAGGAGCTGCACTGTTATTTTTTGTGGCTCTTGTTATTCTTCTTTGCTGTTTAAAGAAAAAAGCTGATGGAAGCTCCAGCGCAGATAAAGGGAAGGGTCCAAGTGGAGGGAGGAGTGAGAAGCCAAAAGAAGAGTTTGGAAGTGGAGTGCAAGACACCGAGAAAAACAAGTTGGTTTTCTTTGAGGGCTGCTCTTATAATTTTGATCTTGAGGATTTGCTTAGGGCTTCTGCTGAAGTTCTCGGAAAGGGTAGTTATGGTACTGCATACAAGGCTGTATTAGAAGAGTCAACAACAGTTGTAGTGAAAAGGTTGAAAGAAGTTGTGGTGAGCAAAAGGGACTTTGAACAACAGATGGAGATTATAGGAAGGGTTGGACAGCATCCAAATGTTTTGCCACTTCGTGCTTATTATTATTCAAAGGATGAGAAGCTTTTGGTATCTGACTATATTCCAAATGGAAATCTATCAACACTCTTGCATGGTAGTCGGGCTGGTGAAAGAACTCTGCTAGATTGGGAGTCTCGAGTGAAAATTTCTATTGGAATTGCCAGAGGAATTGCTCACTTACATTCTGCTGGTGGTCCAAAATTCACACATGGAAATATCAAAGCCTCAAATGTCCTCCTCAACCAAGATAATGATGGCTGCATTTCTGATTTTGGCCTGACACCACTTATGAATGTTCATGCAACCCCTTCACGAGCTGCAGGTTATCGTGCTCCGGAGGTGATTGAAACCCGTAAGCACACTCATAAGTCAGATGTCTACAGTTTTGGTGTCCTTATTCTGGAAATGCTCACTGGGAAAGCGCCACAGCAATCTCCGAGACGTGATGACATGGTTGATCTCCCTAGGTGGGTCCAGTCTGTTGTTAGGGAAGAGTGGACAGCCGAGGTTTTTGATGTCGAGCTAATGAGGTACCAAAATATTGAAGAAGAAATGGTGCAAATGTTGCAAATTGGCATGGCATGTGTGGCAAAGGTTCCTGATATGAGGCCTAGCATGGAGGAAATAGTGAGAATGATCGAAGAGATCCGACAATCTGACTCAGAGAATCGGCCATCTTCTGACGAGAATAAATCTAAGGAACTTAATGTTCAATCTCCATAA 1974 0.4276 MAEVTSTSFLNILYLPAKAHAMKLYCPEMHHFLFIIVILFPLVIADHGSDKQALLDFAAAVPHHRNLKWNPATSICTSWEGITCDPDGNRVVSVRLPGIGLVGTIPANTLGKLDALKNISLRSNLLSGTLPTDITSLHSLQYLYLQRNNLSGDIPSSLPSQLVVLDLSYNSFTGSIPKTLQNLTQLTRLNLQTNSLSGQIPNLNVTKLRHLNLSNNHLNGSIPEALQIFPNSSFEGNSLLCGLPLKSCSLVPQTPSPPTFTPTAPSPPAKQRSKNKLSKAAIIAIAVGGAALLFFVALVILLCCLKKKADGSSSADKGKGPSGGRSEKPKEEFGSGVQDTEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVSKRDFEQQMEIIGRVGQHPNVLPLRAYYYSKDEKLLVSDYIPNGNLSTLLHGSRAGERTLLDWESRVKISIGIARGIAHLHSAGGPKFTHGNIKASNVLLNQDNDGCISDFGLTPLMNVHATPSRAAGYRAPEVIETRKHTHKSDVYSFGVLILEMLTGKAPQQSPRRDDMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIGMACVAKVPDMRPSMEEIVRMIEEIRQSDSENRPSSDENKSKELNVQSP* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1054 657 CDD STKc_IRAK 368 633 - -
Lan2g1054 657 ProSitePatterns Protein kinases ATP-binding region signature. 368 390 IPR017441 GO:0005524
Lan2g1054 657 MobiDBLite consensus disorder prediction 321 337 - -
Lan2g1054 657 SUPERFAMILY L domain-like 60 246 - -
Lan2g1054 657 MobiDBLite consensus disorder prediction 632 648 - -
Lan2g1054 657 PANTHER OS05G0588300 PROTEIN 15 657 - -
Lan2g1054 657 PANTHER LRR RECEPTOR-LIKE KINASE 15 657 - -
Lan2g1054 657 MobiDBLite consensus disorder prediction 632 657 - -
Lan2g1054 657 MobiDBLite consensus disorder prediction 310 337 - -
Lan2g1054 657 Gene3D Ribonuclease Inhibitor 47 203 IPR032675 -
Lan2g1054 657 Pfam Protein kinase domain 365 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g1054 657 Gene3D Phosphorylase Kinase; domain 1 330 437 - -
Lan2g1054 657 ProSiteProfiles Protein kinase domain profile. 362 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g1054 657 Gene3D Transferase(Phosphotransferase) domain 1 438 656 - -
Lan2g1054 657 Gene3D Ribonuclease Inhibitor 204 249 IPR032675 -
Lan2g1054 657 Pfam Leucine Rich Repeat 162 183 IPR001611 GO:0005515
Lan2g1054 657 Pfam Leucine Rich Repeat 207 227 IPR001611 GO:0005515
Lan2g1054 657 SUPERFAMILY Protein kinase-like (PK-like) 366 640 IPR011009 -
Lan2g1054 657 Pfam Leucine rich repeat N-terminal domain 48 85 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1054 Lan-Chr2 21814814 21819469 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1054 32 655 Receptor kinase-like Gene Family AT5G58300 69.108 0.0 851
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan2g1054 Pkinase 4.3e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1054 - - gmx:100818344 994.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1054 2 21814814 21819469 Lan2g1054 2 21814814 21819469 ECH
Lan4g0268 4 4384628 4388835 Lan2g1054 2 21814814 21819469 LSH
Lan2g1054 2 21814814 21819469 Lan16g0559 16 6584678 6588745 LSH
Lan4g0268 4 4384628 4388835 Lan2g1054 2 21814814 21819469 PCT
Lan2g1054 2 21814814 21819469 Lan2g1054 2 21814814 21819469 PCT
Lan16g0559 16 6584678 6588745 Lan2g1054 2 21814814 21819469 PCT
Lan2g1054 2 21814814 21819469 Lan4g0268 4 4384628 4388835 PCT
Lan2g1054 2 21814814 21819469 Lan16g0559 16 6584678 6588745 PCT