Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1049 ATGCAAGATCCGTTTTCAAACCCTAATTCCAATCCCAATCCTCACAATGCCAATGCTGCTTCACTACTTCCGCCGCCTCCGCCGTCCACGACAGCGGCAAACTCATCATCGTCTTCATTTTTCATCCGATCCGGCGGAAATGGAGCATCGCTCCACCGGAGATCCCATTCGGAGGTCAGTTTCCGGTTACCGGACGACATGATGGACCTGTCGCCGTCCGATCCGTTCAACGGCGGGTCATCGACGGCGACATTCGATGAGATCGGATCGGAGGATGATCTGTTTTCCACGTACATTGACGTTGACAAGCTCCGAGGTTCGATCGCGTCGGGCGGCAATGGTGAACCGCCGGAGAAGAACCCTAACGTGAGGCCGAGGCATAGGCACAGTAGTTCAGTGGATGGTTCTACATCATCGTTTGATGAGATTATGGATGCGAAGAAAGCTATGCCTCCTGATAAGTTAGCTGAGCTTTGGACAATTGATCCCAAACGCGCCAAGAGGATACTTGCAAATCGACAATCTGCTGCTCGTTCGAAAGAGAGAAAAGCTCGCTATATACAGGAACTTGAGCGCAAAGTTCAGACCCTTCAGACTGAAGCCACAACACTTTCTGCTCAACTGACGCTGTACCAGAGGGACACGACAGGTTTGAGTACTGAAAATACAGAGCTTAAGGTCCGTCTGCAAGCCATGGAGCAACAAGCACATCTTCGTGATGCTCTTAACGAAGCACTGAAGAAGGAAGTTGAGAGGCTTAAAGTTGCTACTGGGGAGATGATGAGCCCTACCAACTCTTTCAATCTTGGAATACACCAGATGCCATTTACAGGATCAACTTTCTTTCCAATCCCACCACAATCAGGTCCTTCTGGTCAGCAAAACATGCAGTTGCTACCATTTGGTCATGTCCCATCTGGCAGGCCAACTCATCAACTGCAACAAATAAATTCTCATTCGCTCTCAGAAATAATGCAAAATGACCAGCTTGGTTGTTTTCAAGGACTTGACATTAGTAGCAAAGGATCAGCTCTCGTGAAGTCTGAAGGCCCCTCACTCTCTGCAAGTGAGAGTAGCAGTACATTTTGA 1089 0.4885 MQDPFSNPNSNPNPHNANAASLLPPPPPSTTAANSSSSSFFIRSGGNGASLHRRSHSEVSFRLPDDMMDLSPSDPFNGGSSTATFDEIGSEDDLFSTYIDVDKLRGSIASGGNGEPPEKNPNVRPRHRHSSSVDGSTSSFDEIMDAKKAMPPDKLAELWTIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSTENTELKVRLQAMEQQAHLRDALNEALKKEVERLKVATGEMMSPTNSFNLGIHQMPFTGSTFFPIPPQSGPSGQQNMQLLPFGHVPSGRPTHQLQQINSHSLSEIMQNDQLGCFQGLDISSKGSALVKSEGPSLSASESSSTF* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1049 362 CDD bZIP_plant_RF2 165 214 IPR044759 GO:0003700|GO:0006355
Lan2g1049 362 MobiDBLite consensus disorder prediction 106 138 - -
Lan2g1049 362 SUPERFAMILY Leucine zipper domain 164 215 IPR046347 GO:0003700|GO:0006355
Lan2g1049 362 Coils Coil 239 259 - -
Lan2g1049 362 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 3 359 - -
Lan2g1049 362 MobiDBLite consensus disorder prediction 1 87 - -
Lan2g1049 362 SMART brlzneu 160 224 IPR004827 GO:0003700|GO:0006355
Lan2g1049 362 MobiDBLite consensus disorder prediction 1 18 - -
Lan2g1049 362 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 162 225 IPR004827 GO:0003700|GO:0006355
Lan2g1049 362 MobiDBLite consensus disorder prediction 32 54 - -
Lan2g1049 362 Pfam bZIP transcription factor 164 219 IPR004827 GO:0003700|GO:0006355
Lan2g1049 362 PANTHER ATBZIP TRANSCRIPTION FACTOR 3 359 - -
Lan2g1049 362 Coils Coil 180 207 - -
Lan2g1049 362 Gene3D - 163 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1049 Lan-Chr2 21734446 21737390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1049 1 362 bZIP Transcription Factor Family AT2G40620 51.880 9.78e-103 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan2g1049 bZIP_1 5.2e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1049 - - vra:106763153 459.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1049 2 21734446 21737390 Lan2g1049 2 21734446 21737390 ECH
Lan2g1049 2 21734446 21737390 Lan16g0548 16 6379343 6383147 LSH
Lan2g1049 2 21734446 21737390 Lan9g1243 9 19715464 19718141 LSH
Lan2g1049 2 21734446 21737390 Lan2g1049 2 21734446 21737390 PCT
Lan2g1049 2 21734446 21737390 Lan9g1243 9 19715464 19718141 PCT
Lan16g0548 16 6379343 6383147 Lan2g1049 2 21734446 21737390 PCT
Lan2g1049 2 21734446 21737390 Lan16g0548 16 6379343 6383147 PCT
Lan9g1243 9 19715464 19718141 Lan2g1049 2 21734446 21737390 PCT