Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1047 ATGTATTCAATGAAAGAGAACAAAGAAGATTGCAAGGTAGAACATGGTTATGTGGAAACTGACCCAACTGGTCGTTATGGCAGGTTTGGAGATGTTCTTGGAAAAGGGGCAATGAAGACAGTGTACAAAGCAATTGATGAGGTCCTTGGAATAGAGGTAGCATGGAACCAGGTTAAATTCAATGAGGCGCTTCGCACACCGGACGATTTGCAGCGACTTTACTCAGAGGTTCATCTCCTCAGCAGCCTCAAGCATCACTCCATCATCCGATTCTATACCTCTTGGATTGATGTTGATAACAAGGCCTTCAACTTTGTTACAGAAATGTTCACATCAGGATCCCTTAGAGAATACCGAAAGAAATATAAGCAAGTTAGCATAAAAGCGATAAAAAGCTGGTCTCGACAAATCTTACAAGGTCTTGTTTATTTACATGAGCATGATCCACCAGTAATCCATAGGGACCTCAAATGTGATAATATATTTGTCAATGGCCATCTTGGACAAGTGAAAATTGGTGACCTAGGACTAGCTGCAATTCTCCGTGGTTCTCAGCCAGCCCACAGTGTTATAGGCACACCGGAATTCATGGCGCCAGAATTATATGAGGAAGAATACAATGAACTTGTTGATGTGTACTCATTTGGCATGTGTGTATTGGAAATGTTTACATCTGATTATCCATATAGTGAATGTACTAACCCAGCACAGATTTACAAGAAAGTAACATCGGGTAAGCTACCAATGGCGTTTTTCCGGATTGAAGATATGGAAGCACGGAAGTTTATTGGAAAGTGCCTAGGACCTGCATCACAAAGACCATCAGCAAAAGATTTGTTGCTTGATCCTTTTCTTATGTCGGATGAAACATCATTAACAGCGAAGTTTGGAATTCAAAAGCCACTTTTGAATAACATTGAGATGGGAAAACTTCACTTGAGTGATGATTTAACTAGGACTGAAATGAAAATAATAGGGAAGCTGAATCCTGAAGATGATGCTATCTTTCTCAAAGTGCAAATTCCTGATAAGGATGGTTCTGTTAGGAATGTATTTTTTCCCTTTGAAATTTTCACTGACACCCCCATTGATGTTGCAATGGAGATGGTAAAGGAGTTGGAAATTTCTGATTGGGAGCCTTTTGAAATTGCAAATATGATTGAAGGAGAGATATCTGCTCTACTACCACAGAGGAGGGAAAGTAACTGTTCAGATGCATGTCATACATTTAGTTATCAAGTTGATGACGATGAAGGACCTCATCATCATTTTCGATCATTCTCGTCTTGTTCATCATCTCAAGAATCAATAACAGGTTTAGTAAGTGGAAATTATTGGCCCCATGATGATTTGCTTGATGATGCTAGTTCAAGATGTTCTTCACAAGGGACATATTCCAACTTGAATTATTATTCCATCGATGATAAAGTACCCATCATTAAAAGTCACAAGTGTACGAGATTTTCACCTAATGAAGACTTAAGCAATTGCAACCAATGTAAAGTTCTAGTAAGATCACAAACAACTTCTACCAATAAAAGTAAGAATGTGATAGACAATCACAGAATGACAAGGAACAAGTCATTGATTGATCTTAGGAGCCAACTATTACACCGATCGCTGGTCGAAGAGGTTCACAAAAGACGGTTATTCAAGACAGTTGGTTCTGTGGAAAATATTGGATATCAGGCACCATATGATGATTCCACAAAAAAACTCACTTCAAGAGTGGCAAGGGAGAACAACTTAAGAGATGAAAATATTTAG 1767 0.3871 MYSMKENKEDCKVEHGYVETDPTGRYGRFGDVLGKGAMKTVYKAIDEVLGIEVAWNQVKFNEALRTPDDLQRLYSEVHLLSSLKHHSIIRFYTSWIDVDNKAFNFVTEMFTSGSLREYRKKYKQVSIKAIKSWSRQILQGLVYLHEHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSQPAHSVIGTPEFMAPELYEEEYNELVDVYSFGMCVLEMFTSDYPYSECTNPAQIYKKVTSGKLPMAFFRIEDMEARKFIGKCLGPASQRPSAKDLLLDPFLMSDETSLTAKFGIQKPLLNNIEMGKLHLSDDLTRTEMKIIGKLNPEDDAIFLKVQIPDKDGSVRNVFFPFEIFTDTPIDVAMEMVKELEISDWEPFEIANMIEGEISALLPQRRESNCSDACHTFSYQVDDDEGPHHHFRSFSSCSSSQESITGLVSGNYWPHDDLLDDASSRCSSQGTYSNLNYYSIDDKVPIIKSHKCTRFSPNEDLSNCNQCKVLVRSQTTSTNKSKNVIDNHRMTRNKSLIDLRSQLLHRSLVEEVHKRRLFKTVGSVENIGYQAPYDDSTKKLTSRVARENNLRDENI* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1047 588 SUPERFAMILY Protein kinase-like (PK-like) 28 286 IPR011009 -
Lan2g1047 588 Gene3D Transferase(Phosphotransferase) domain 1 110 292 - -
Lan2g1047 588 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g1047 588 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Lan2g1047 588 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 5 579 - -
Lan2g1047 588 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g1047 588 CDD STKc_WNK 25 285 - -
Lan2g1047 588 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Lan2g1047 588 Pfam Protein kinase domain 31 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g1047 588 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK4-RELATED 5 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1047 Lan-Chr2 21715928 21720487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1047 17 576 MAP Kinase Kinase Kinase AT5G58350 60.659 0.0 653
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lan2g1047 Pkinase 2.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1047 K08867 - gmx:100272203 875.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1047 2 21715928 21720487 Lan2g1047 2 21715928 21720487 ECH
Lan2g1047 2 21715928 21720487 Lan16g0541 16 6292048 6296853 LSH
Lan2g1047 2 21715928 21720487 Lan11g0357 11 2582043 2586270 LSH
Lan2g1047 2 21715928 21720487 Lan2g1047 2 21715928 21720487 PCT
Lan2g1047 2 21715928 21720487 Lan11g0357 11 2582043 2586270 PCT
Lan16g0541 16 6292048 6296853 Lan2g1047 2 21715928 21720487 PCT
Lan2g1047 2 21715928 21720487 Lan16g0541 16 6292048 6296853 PCT
Lan11g0357 11 2582043 2586270 Lan2g1047 2 21715928 21720487 PCT