Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1043 ATGAGGAATAAGTCAAATGTCTTAATGGAAAGATATGAGTTAGGAAGATTACTAGGCCAAGGCACATTTGGAAAGGTTTACTATGGTCGGAGTGTGATAACTAACCAGAGTGTGGCTATTAAAGTGATTGACAAGGATAAGGTTATGAGAACTGGGCAAGCTGATCGTATACTACGGGAAATATCTATTATGAGACTGGTTAAACATCCAAATATTATACAGCTTTTTGAGGTCATGGCCACAAAGAGTAAGATTTACTTTGTTATTGAATATGCTAAAGGTGGTGAGCTCTTCAACAAGGTGGAAAAAGCAAAGCTCAAAGAAGATGTTGCATTCAAATATTTTAGGCAGCTAATCAGCGCTGTGGATTTTTGTCACAGCAGAGGCGTATACCATAGAGATATAAAGCCAGAGAACCTTTTATTGGATGAAAATGAGAACCTAAAGGTCTCAGATTTTGGGTTAAGTGCCTTGACCGAATCCAAACGGCAGGATGGCTTCCTACATACAGCTTGTGGAACACCTGCCTATGTTGCTCCTGAAATCATCAAAAGGAAGGGCTATGAAGGTGCCAGAGCTGATATCTGGTCTTGTGGAGTAGTCCTGTTTGTCCTAATGGCTGGTTATCTTCCTTTTAATGACCCAAATGTTATTGAGTTGTATAGGAAGATAGGGAAAGCAGAGTTTACATGTCCTGATTGGTTCCCACGAGAAGTCCGGAGGCTGTTGCGCAAGATGTTGGATCCAAACCCTGACACGAGGATTTCCATAACTAAGATTAAGGAGAGTTCTTGGTATAGGAAAGGGCTAAGTGCTACCTCTAGACAGACAAGACGTTTAGGGAAAAACAAGACCACCTCTGCTGCTGTTACGAATCATTCTTGTCAATGTGATGAAAGGGATAGTCTAGCAGCCGAAGCAAGGCAAGAGTTAGTTGTTCCCACAAGTATAAATGCCTTTGATATCATTTCTCTTTCGCCTGGTTTTAATCTTTCCCGAATCTTCGAAGACGAATTTCAGAAAAGGGAAGCAAGGTTTAGTTCAAGACAACCTGCATCAGCCATCGTCTCCAAGCTGGAAGAAATTGCTAAGCGGCTGAAGCTGAAAATAAATAGAAGAGCTGCAGGTTTGTTGAAATTAGAGGGCCTAAATGAAGGTAGGAAGGGGATTTTATCCATTGATGCAGAAATCTTCGAGATTACGCCATCTTTCCATATGGTGGAGGTGCAAAAATCCAATGGAGATACATTGGAGTATCAGAAAATATTGAATGAGGATATAAGGCCTGCTCTTAAGGATATTGTTTGGGTTTGGCAAAGTGACCAACAAGAGCAACCACAACAGTCAGAGCAACATCAACAGATACATGACCAGCAGCAAGAACAGCCACAGTGA 1395 0.4136 MRNKSNVLMERYELGRLLGQGTFGKVYYGRSVITNQSVAIKVIDKDKVMRTGQADRILREISIMRLVKHPNIIQLFEVMATKSKIYFVIEYAKGGELFNKVEKAKLKEDVAFKYFRQLISAVDFCHSRGVYHRDIKPENLLLDENENLKVSDFGLSALTESKRQDGFLHTACGTPAYVAPEIIKRKGYEGARADIWSCGVVLFVLMAGYLPFNDPNVIELYRKIGKAEFTCPDWFPREVRRLLRKMLDPNPDTRISITKIKESSWYRKGLSATSRQTRRLGKNKTTSAAVTNHSCQCDERDSLAAEARQELVVPTSINAFDIISLSPGFNLSRIFEDEFQKREARFSSRQPASAIVSKLEEIAKRLKLKINRRAAGLLKLEGLNEGRKGILSIDAEIFEITPSFHMVEVQKSNGDTLEYQKILNEDIRPALKDIVWVWQSDQQEQPQQSEQHQQIHDQQQEQPQ* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1043 464 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g1043 464 PANTHER - 3 454 - -
Lan2g1043 464 Pfam Protein kinase domain 12 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g1043 464 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g1043 464 Gene3D Transferase(Phosphotransferase) domain 1 3 316 - -
Lan2g1043 464 MobiDBLite consensus disorder prediction 442 464 - -
Lan2g1043 464 SUPERFAMILY Protein kinase-like (PK-like) 8 314 IPR011009 -
Lan2g1043 464 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Lan2g1043 464 Pfam NAF domain 314 371 IPR004041 GO:0007165
Lan2g1043 464 ProSiteProfiles NAF domain profile. 312 336 IPR018451 GO:0007165
Lan2g1043 464 CDD CIPK_C 318 432 - -
Lan2g1043 464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Lan2g1043 464 Gene3D Kinase associated domain 1, KA1 317 437 - -
Lan2g1043 464 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 3 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1043 Lan-Chr2 21626613 21629373 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1043 1 444 CBL-interacting serine-threonine protein kinases AT5G58380 64.254 0.0 628
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lan2g1043 Pkinase 8.2e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1043 - K07198 gmx:100779316 688.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1043 2 21626613 21629373 Lan2g1043 2 21626613 21629373 ECH
Lan12g0185 12 3016834 3018873 Lan2g1043 2 21626613 21629373 ECH
Lan4g0295 4 4968641 4970706 Lan2g1043 2 21626613 21629373 LSH
Lan2g1043 2 21626613 21629373 Lan16g0534 16 6222990 6225867 LSH
Lan4g0295 4 4968641 4970706 Lan2g1043 2 21626613 21629373 PCT
Lan2g1043 2 21626613 21629373 Lan2g1043 2 21626613 21629373 PCT
Lan16g0534 16 6222990 6225867 Lan2g1043 2 21626613 21629373 PCT
Lan2g1043 2 21626613 21629373 Lan4g0295 4 4968641 4970706 PCT
Lan2g1043 2 21626613 21629373 Lan16g0534 16 6222990 6225867 PCT