Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1041 ATGACTGCTTCTCATTTCCAATATTTCCTTTTCATTGTTTTGGTCACCTTAGCAACATTAGTCGTGATCCCTACTACACATGCCAAGTTGAGTCCTAACTACTATAACAAAGTTTGCCCTAAAGCATTAACAACCATAAGGTCTGTTGTTAAGAAAGCAATTGCTCGTGAGCGCCGTATTGGAGCATCTTTGCTGCGTCTTCATTTCCATGACTGCTTTGTTAATGGTTGTGATGCATCAGTTCTTCTAGATGACACTCCTTCATTTGCGGGTGAGAAGACTTCATTCCCAAATAATAATTCACTGAGAGGGTTTGATGTGGTTGATGAGATTAAAGCAGCTGTTGACAAAGCTTGCAAACGCCCTGTGGTATCATGTGCTGATATCTTAGCTGTTGCAGCTCGTGATTCTGTAGCCATATTGGGAGGACAGAAATACTGGTACCAAGTGTTATTAGGCAGAAGAGATGCAAGAAATGCATCATGGGATGCTGCAAATAAAAATCTTCCTCCTCCATTTTTCAACTTCACACAGCTTCTTGGCCTTTTCCAGGGTCATGGGCTGAACCTTAAAGACCTTGTAGTCCTCTCTGGAGCCCACACCATTGGTGCTAGCCAATGCGGTGTTTTCAGAGACAGGATCTACAATGACACCAACATTGACCCAACATTTGCTGCGAATTTGCGTAACATATGCCCTCAAACTGGAAGTGACACCAATTTAGCACCATTGGATTCAACTCCTAAGAAATTTGACACCGTATTCTATACTTCTTTGTTGTATAAAAAGGGTCTTCTTCATTCTGATCAAGAACTCTTCAAGGGTGATGGCAGTGTCAGTGATAATTTGGTGCAACTATACAGCAAAAACTCTCACGCTTTTGCTGCAGACTTTGGACCTTCCGTGATCAAGATGGGTAACATCAAGCCTCTTACTGGAAATAATGGAGAGATCAGATGTCATTGCAGGAAAGTCAACGACTTCTAA 987 0.4195 MTASHFQYFLFIVLVTLATLVVIPTTHAKLSPNYYNKVCPKALTTIRSVVKKAIARERRIGASLLRLHFHDCFVNGCDASVLLDDTPSFAGEKTSFPNNNSLRGFDVVDEIKAAVDKACKRPVVSCADILAVAARDSVAILGGQKYWYQVLLGRRDARNASWDAANKNLPPPFFNFTQLLGLFQGHGLNLKDLVVLSGAHTIGASQCGVFRDRIYNDTNIDPTFAANLRNICPQTGSDTNLAPLDSTPKKFDTVFYTSLLYKKGLLHSDQELFKGDGSVSDNLVQLYSKNSHAFAADFGPSVIKMGNIKPLTGNNGEIRCHCRKVNDF* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1041 328 Gene3D - 33 323 - -
Lan2g1041 328 Pfam Peroxidase 47 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan2g1041 328 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan2g1041 328 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan2g1041 328 PRINTS Haem peroxidase superfamily signature 144 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan2g1041 328 PRINTS Haem peroxidase superfamily signature 192 207 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan2g1041 328 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan2g1041 328 PANTHER PEROXIDASE 72-RELATED 10 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan2g1041 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 192 202 IPR019793 -
Lan2g1041 328 ProSiteProfiles Plant heme peroxidase family profile. 29 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan2g1041 328 SUPERFAMILY Heme-dependent peroxidases 30 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lan2g1041 328 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Lan2g1041 328 Gene3D Peroxidase, domain 2 170 305 - -
Lan2g1041 328 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan2g1041 328 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan2g1041 328 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan2g1041 328 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan2g1041 328 PRINTS Plant peroxidase signature 191 203 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan2g1041 328 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan2g1041 328 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan2g1041 328 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan2g1041 328 PANTHER CATIONIC PEROXIDASE 10 326 - -
Lan2g1041 328 CDD secretory_peroxidase 29 325 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1041 Lan-Chr2 21562733 21564435 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1041 27 326 Peroxidase AT5G05340 54.125 5.56e-111 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1041 K00430 - gmx:100816580 463.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1041 2 21562733 21564435 Lan9g1234 9 19645154 19648139 LSH
Lan2g1041 2 21562733 21564435 Lan11g0364 11 2638437 2641479 LSH
Lan2g1040 2 21548770 21550686 Lan2g1041 2 21562733 21564435 PCT
Lan2g1041 2 21562733 21564435 Lan2g1042 2 21612633 21614221 PCT
Lan2g1041 2 21562733 21564435 Lan9g1234 9 19645154 19648139 PCT
Lan2g1042 2 21612633 21614221 Lan2g1041 2 21562733 21564435 PCT
Lan9g1234 9 19645154 19648139 Lan2g1041 2 21562733 21564435 PCT
Lan2g1041 2 21562733 21564435 Lan2g1040 2 21548770 21550686 PCT