Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1031 ATGGCCTCTTCTTCTAGTAGTTTAGACACTACTCATGCAAACTCTTACAACAACTTCACCTTCTCAACACACCCTTTTATGACCACATCATTATCTGAACTTTTAGCTTCTCCCATGGATGATAATAGTAATAGTAATAATAATAATAATAATAAGAATCATGGTAGTGGTGGTTTATCAGATCGTATAGCTGAAAGAACTGGTTCTGGTGTACCAAAATTCAAGTCTATACAACCTCCTTCACTTCCTCTATCTCCTCCTCTTTTTTCTCCTTCTTCTTACTTTGCTATTCCTCCTGGTTTGAGCCCTGCTGAACTTCTTGATTCTCCTGTTCTCTTAAACTCTTCTCATACTTTGCCATCTCCAACAACTGGAGCATTTTCTGCTCAGACTCAGAGTTACAATGATTGGAAGAACAATTCAAGGAGTAACCAACAAATTATCAAAGAAGAAGAGAAAAAATTCTCAAACTTCACTTTTCAAACCCAATCACAACAACCATGGAGTTATCAGGAAGCTACAAAACATGATAATTTTTCTTCAGGGAGGAGTATGATGAAAACTGAAAACTCTTCTTCCATGCAGAGTTTTCAGCCAGAGTTTTCAAGTGTTCAAACTAATAACCACAATTACCAACAACAACAACCACAAGTTCAGACCTTAAGTAGAAGATCAGATGATGGATACAATTGGAGGAAATATGGACAAAAACAAGTAAAGGGAAGTGAAAACCCAAGGAGTTATTACAAATGCACATACCCTAATTGTCCTACAAAAAAGAAGGTTGAAAGGTCTTTGGATGGACAAATAACTGAGATAGTTTACAAGGGTAGTCATAACCATCCTAAGCCTCAGAATACTAGGAGAAGTTCATCATCTTCCTCTTCTGTTTCAATGATTCCTTCAAATCCCATCAGCTCAGAAATACAAGATCAATCATATGCTACCAATGGTAGTGGACAAATGGATTCTGTTGCTACCCCAGAAAATTCATCAATATCAATAGGAGATTGTGATTTTGAGCAGAGTTCTCAAAAGTGTAGGTCAGGAGGGGATGAGTATGATGAAGATGAACCTGATTCAAAAAGATGGAAAAATGAAGGAGAAAATGAGGGTATATCAGCTCCTGGAAGTAGAACTGTTAAGGAACCAAGGGTTGTGGTTCAGACAACAAGTGACATTGATATCCTAGATGATGGGTACAGATGGAGGAAATATGGACAGAAAGTAGTAAAGGGTAATCCTAATCCAAGGAGTTACTACAAGTGCACACACCAAGGTTGTCCAGTGAGGAAGCATGTAGAAAGAGCCTCACATGACCTTAGAGCAGTGATAACAACCTATGAGGGAAAACACAACCATGATGTCCCTGCAGCACGTGGAAGTGGCAACCATTCAGTTAATAGAACAATGCTAAACAACAACACTACAAACCCCAACAATGCAGCCATAAGGCCCATGCCATTGAACCACTCAAGTAATAATTCTCTTCAGAGTCTTAGGCCACAAGCACCAGACTTCACACTAGAGATGCTGCAGAGCCCGGGAAGTTTTGGATTCTCGGGCTTCGGGAATCCAATGGGGTCTTACATGAATCAGCAGCAACAACAACTATCTGACAATGTGTTTTCTTCCAGAGCAAAGGAGGAGCCCAGAGATGACACGTTCCTTGATTCTTTGCTATGCTGA 1689 0.3961 MASSSSSLDTTHANSYNNFTFSTHPFMTTSLSELLASPMDDNSNSNNNNNNKNHGSGGLSDRIAERTGSGVPKFKSIQPPSLPLSPPLFSPSSYFAIPPGLSPAELLDSPVLLNSSHTLPSPTTGAFSAQTQSYNDWKNNSRSNQQIIKEEEKKFSNFTFQTQSQQPWSYQEATKHDNFSSGRSMMKTENSSSMQSFQPEFSSVQTNNHNYQQQQPQVQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSLDGQITEIVYKGSHNHPKPQNTRRSSSSSSSVSMIPSNPISSEIQDQSYATNGSGQMDSVATPENSSISIGDCDFEQSSQKCRSGGDEYDEDEPDSKRWKNEGENEGISAPGSRTVKEPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHQGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGNHSVNRTMLNNNTTNPNNAAIRPMPLNHSSNNSLQSLRPQAPDFTLEMLQSPGSFGFSGFGNPMGSYMNQQQQQLSDNVFSSRAKEEPRDDTFLDSLLC* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1031 562 Gene3D WRKY domain 210 285 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan2g1031 562 MobiDBLite consensus disorder prediction 35 80 - -
Lan2g1031 562 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 52 538 IPR044810 GO:0003700
Lan2g1031 562 MobiDBLite consensus disorder prediction 210 229 - -
Lan2g1031 562 SMART WRKY_cls 397 456 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan2g1031 562 SMART WRKY_cls 225 283 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan2g1031 562 MobiDBLite consensus disorder prediction 526 562 - -
Lan2g1031 562 Pfam WRKY DNA -binding domain 398 454 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan2g1031 562 Pfam WRKY DNA -binding domain 226 282 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan2g1031 562 MobiDBLite consensus disorder prediction 275 378 - -
Lan2g1031 562 PANTHER WRKY TRANSCRIPTION FACTOR WRKY24-LIKE 52 538 - -
Lan2g1031 562 Gene3D WRKY domain 384 450 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan2g1031 562 ProSiteProfiles WRKY domain profile. 392 457 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan2g1031 562 MobiDBLite consensus disorder prediction 346 369 - -
Lan2g1031 562 SUPERFAMILY WRKY DNA-binding domain 224 284 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan2g1031 562 MobiDBLite consensus disorder prediction 210 225 - -
Lan2g1031 562 MobiDBLite consensus disorder prediction 280 345 - -
Lan2g1031 562 SUPERFAMILY WRKY DNA-binding domain 389 457 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan2g1031 562 MobiDBLite consensus disorder prediction 35 57 - -
Lan2g1031 562 MobiDBLite consensus disorder prediction 526 544 - -
Lan2g1031 562 MobiDBLite consensus disorder prediction 162 201 - -
Lan2g1031 562 ProSiteProfiles WRKY domain profile. 226 284 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1031 Lan-Chr2 21360251 21363912 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1031 71 561 WRKY Transcription Factor Family AT2G38470 49.511 6.75e-119 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan2g1031 WRKY 1.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1031 K13424 - gmx:100127385 822.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1031 2 21360251 21363912 Lan2g1031 2 21360251 21363912 ECH
Lan4g0064 4 841540 846019 Lan2g1031 2 21360251 21363912 LSH
Lan2g1031 2 21360251 21363912 Lan9g1229 9 19574023 19576986 LSH
Lan2g1031 2 21360251 21363912 Lan11g0370 11 2674289 2677742 LSH
Lan4g0064 4 841540 846019 Lan2g1031 2 21360251 21363912 PCT
Lan2g1031 2 21360251 21363912 Lan2g1031 2 21360251 21363912 PCT
Lan2g1031 2 21360251 21363912 Lan11g0370 11 2674289 2677742 PCT
Lan2g1031 2 21360251 21363912 Lan9g1229 9 19574023 19576986 PCT
Lan9g1229 9 19574023 19576986 Lan2g1031 2 21360251 21363912 PCT
Lan2g1031 2 21360251 21363912 Lan4g0064 4 841540 846019 PCT
Lan11g0370 11 2674289 2677742 Lan2g1031 2 21360251 21363912 PCT