Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1028 ATGGCTGAAAACGGTGAAGAGAAATTACTCGCTGTGGCGCGGCACATAGCAAAAACCCTAGGCCACAACAACATCAACATGGCCGATGATATTCTACAAATCTTCTCAAACTTCGACGGAAGGTTCTCGAAGGAGAATCTTTCTGATAAGGTTCTAGATTCTGATCATAGATCCTGCGTCGCACTCGATCATTCCCTCAAATCACTCGATCAACGTATCTCTCACTTTGTCTCCTCCGATCACCCGATTTGGGCTGACTCTGCTGACTCCGCCGCCTTCCTCGACGCCGTTGACGATCTCGTCGCTGCTCTCTCCGAGTGGAGTTCCCTTGCCGCTGACAAGTCCGTTGGAGCGTGTATCGCACGCACCGAGGATATGCTCCAGCAGGCTATGTTCCGCCTCGAGGATGAGTTCCGGTGGCTCATGGAACGCGGTGGTGAGTCCTACGACTTGACTCGTCCGTACAGCAAGTCAACGGAGAATAACATGCCGTTTGACTCGGAGGAAGATGAAGAAGAGGAGCAACAGATTCCGGTGGCGCTTCCGGTAACCGATTACGACATCGTGATTGATGCGTTGCCATCGGGAACGATCAACGACCTTCACGAGATCGCGAAGCGAATGGTGGCCGGAGGGTTCAGGAAGGAGTGTTCGCATGTGTATAGCAGTTGCCGGAGGGAGTTCTTAGAGGAAAGCCTTTCCAGGCTAGGGTTACAGAAACTGAGCGTCGAAGAGGTTCACAAGAAGACGTGGCAGGAACTCGAAGACGAAATCGAAAGATGGATTAAGGCTTCGAACGTCGCTCTTCGGATTCTGTTCCCCAGTGAGAGGAGACTCTGCGATCGCGTCTTCTTCGGATTCTCCTCCGCCGCGGATCTCTCTTTCATGGAGGTTTGCAGGGTATCCGCGATTCAGTTGCTCAATTTCGCCGATTCAGTCGCGATTGGGAGCCGTTCGCCAGAGCGGTTGTTTAGAATCCTCGATGTGTTTGAAACATTGCGTGACCTAATTCCAGAGTTTGAATCGTTGTTCTCTGATCAGTACAGTGTGTTGCTTAGGAATGAAGCAATTACAATTTGGAAGAGGTTGGGGGAAGCAATTAAAGGAATTTTTATGGAATTGGAGAACTCAATTCGGCGTGATCCAGCAAAGGTGGCTGTTCCTGGCGGCGGCCTTCATCCGATTACTCGCTATGTGATGAACTATCTCCTTGCTGCGAGCCGGTCACGTATATCCTTGGAGCAAGTATTTGAAGAATATCCAAAGCTTGATGATAGAGTTGCATCATCCACTTCTTCATTATCAGTGCAAATGGATTGGATTATGGAACTATTACAAACCAATTTGGAAGCTAAGTCCAAAATCTACAAAGACACTGCTTTGAGCTATGTTTTCTTGATGAATAATGGGAGATACATAGTTCAAAAGGTAAAAGATAGTGAATTGGGAACCCTATTGGGTGATGATTGGATCAGAAAACACACTGCAAAAGTGTGGCAATACCATGTTCAATATCAGAGAAGTTCATGGAATAAGGTTTTGGGGATTCTGAAATTGGATAACAGCAATGGGTCAATGGGGGCTAATGGTTTTGCAAAGACAATAAAGGAGAAGATGAAGTTGTTCAACACGCAGTTCGAAGAAATATGCAAAGTTCAGTGTACATGGTTTGTGTTTGATGAACAGCTGAGGGAAGAAATAAGAATCTCCCTTGAGAAAATATTGTTGCCAGTATATGGAAACTTCATTGTGAGGTTCCGTAGTGTACCAGAGCTTGATAAGCTTGGTGATAAGTATATTAGGTATGGAACAGAGGACATTGAAGCAAAAATTAATGAGTTGTTTCAAGGAACCAGTGGATCAAATGGGAGCTGTAAGTGA 1881 0.4641 MAENGEEKLLAVARHIAKTLGHNNINMADDILQIFSNFDGRFSKENLSDKVLDSDHRSCVALDHSLKSLDQRISHFVSSDHPIWADSADSAAFLDAVDDLVAALSEWSSLAADKSVGACIARTEDMLQQAMFRLEDEFRWLMERGGESYDLTRPYSKSTENNMPFDSEEDEEEEQQIPVALPVTDYDIVIDALPSGTINDLHEIAKRMVAGGFRKECSHVYSSCRREFLEESLSRLGLQKLSVEEVHKKTWQELEDEIERWIKASNVALRILFPSERRLCDRVFFGFSSAADLSFMEVCRVSAIQLLNFADSVAIGSRSPERLFRILDVFETLRDLIPEFESLFSDQYSVLLRNEAITIWKRLGEAIKGIFMELENSIRRDPAKVAVPGGGLHPITRYVMNYLLAASRSRISLEQVFEEYPKLDDRVASSTSSLSVQMDWIMELLQTNLEAKSKIYKDTALSYVFLMNNGRYIVQKVKDSELGTLLGDDWIRKHTAKVWQYHVQYQRSSWNKVLGILKLDNSNGSMGANGFAKTIKEKMKLFNTQFEEICKVQCTWFVFDEQLREEIRISLEKILLPVYGNFIVRFRSVPELDKLGDKYIRYGTEDIEAKINELFQGTSGSNGSCK* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1028 626 Pfam Exo70 exocyst complex subunit 259 613 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lan2g1028 626 SUPERFAMILY Cullin repeat-like 84 615 IPR016159 -
Lan2g1028 626 MobiDBLite consensus disorder prediction 151 173 - -
Lan2g1028 626 PANTHER EXOCYST COMPLEX PROTEIN EXO70 30 616 IPR004140 GO:0000145|GO:0006887
Lan2g1028 626 Gene3D Exocyst complex component Exo70 83 623 - -
Lan2g1028 626 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 30 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1028 Lan-Chr2 21325770 21327921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1028 1 619 EXO70 exocyst subunit family AT5G58430 70.064 0.0 880
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1028 K07195 - gmx:100803694 972.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1028 2 21325770 21327921 Lan9g1225 9 19553244 19555447 LSH