Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1017 ATGGCTTCACCGTTAGAGTGCTGGTCAAGCCGCACCACCACCACCACCACCACCACCACCGACGATGACACCGTGGAGCAGGTTCTCATGAGGTCCCACCACAGATCCGAGGCAACAACAACCCCTTCATTCTCTTCATCAACAAAAGATTCTTCTATTGTTCAAAAGAAATTACGCAAGTTCGCCCGAAACGTTTCAGAGGCAATAAACTCGTTCAAAAACTCACTTAATCTCGATTCTACTCGCGACCCAACTTCTTCTAAGATCGAAGCTTCTAGAAAAATCACGTGGGGTACCGTTGTTAAGAATCTTACTCAACTCTACCCTGGAAGCCAGTTACCGGAGAAGCTTATGTGCAATATTCGCAAGCACTATGATTCCTTGCCTCTCAGTTATGGACAAGCAGAATTTGATATGAAAGATGTGTTTCTTCACATCAAGCTGATAGAGCAAGCATCAGAGACTGACCAGCCTGCAATTTTGTTTCAAGAAGAAACTGACAATGATGGTGAATTTGAGGGGTCTTTCTTGAAGCTCACTTTTGCTTGCAACTCTCCAATTTCATGGCCTGCAATGTCAAGTGCATTGGATAGTTCATCCATCAACTGCAAAAAGGTGCAGATCTTTGAGAAGAAAAGTTTCACCCTCGGAGTTGCTATTCTTGTTTATCAGTCCGGGCAAGATAAATTTGTTAGAATGCGAGTCGAAAATGCGATAAAGTTTGCCATGAAGAAGCCCAGATCCAGTGCTGTGAAGCTTCCATTCGGACTTTGCGGATGTCAAGAAGAGAACTTCAGGGGGAAGGAACTTGGAGAGAGTGAAGAGGATGGTGGTGATGCATGTTTTGGAAAGGAGTTTGAGAATTCATGCCAAAATATTCAGCTTCAGATGCCATTGCCTAGTTCATCTTTTATTGTATCAGTAGATGAGTGGCAGACAATTCATTCGTGTGTGGATGAGATTGAAAAATGGTTGTTGAGTTCAGATAGTGTCGAGTTTACTGATCAGGTTGAACCTAATTCATATAAAGGGCTCTATATTGGGAAAAGGGTTGGGGTTGAGAAGCTTAAAGGATGTGACAAAGGGAATTCTTATGAGTTCGAGCTCCGCAAGGATCTTCTGGAACTGATGACTTGTGGCCATAGAAACATTCTACAATTCTGTGGTGTATGTGTTCATGATAATCATGGGTTGTGTGTGGTTACTAAATACATGGAAGGTGGATCTGTTCATGACTTAATGTCGAAGAATAAGAAGCTCCAGGCTAAGGATATCGTGAGAATCGCAGTTGATGTGGCTGAGGGTATGAAGTTTATGAATGATCATGGTGTTGCATATAGGGACCTTAATACTCAGAGGATTCTATTGGATAAGCATGGCAATGCTTGCTTGGGAGATATGGGTATAGTCACTGCCTGCAGGAGTGTTGGAGAAGCAATGGAGTATGAAACTGATGGTTACAGATGGTTAGCTCCAGAGATAATTGCCGGTGACCCCGAGAGTGTGACAGAGACATGGATGAGTAATGTTTACAGTTACGGGATGGTTATTTGGGAGATGGTAACTAGTGAAGTAGCCTATTCTGCATTTTCACCTGTGCAGGCAGCAGTGGGCATTGCTGCATGTGGCCTTAGACCTGAGATTCCCAAAGACTGCCCCCAAACTCTAAAATATCTTATGACAAAGTGCTGGAACAATTCCCCGTCGAAACGCCCTCAGTTCTCTGACATTTTAGCAATATTACTACGACCAAACAACAACAATAGGTAA 1770 0.4328 MASPLECWSSRTTTTTTTTTDDDTVEQVLMRSHHRSEATTTPSFSSSTKDSSIVQKKLRKFARNVSEAINSFKNSLNLDSTRDPTSSKIEASRKITWGTVVKNLTQLYPGSQLPEKLMCNIRKHYDSLPLSYGQAEFDMKDVFLHIKLIEQASETDQPAILFQEETDNDGEFEGSFLKLTFACNSPISWPAMSSALDSSSINCKKVQIFEKKSFTLGVAILVYQSGQDKFVRMRVENAIKFAMKKPRSSAVKLPFGLCGCQEENFRGKELGESEEDGGDACFGKEFENSCQNIQLQMPLPSSSFIVSVDEWQTIHSCVDEIEKWLLSSDSVEFTDQVEPNSYKGLYIGKRVGVEKLKGCDKGNSYEFELRKDLLELMTCGHRNILQFCGVCVHDNHGLCVVTKYMEGGSVHDLMSKNKKLQAKDIVRIAVDVAEGMKFMNDHGVAYRDLNTQRILLDKHGNACLGDMGIVTACRSVGEAMEYETDGYRWLAPEIIAGDPESVTETWMSNVYSYGMVIWEMVTSEVAYSAFSPVQAAVGIAACGLRPEIPKDCPQTLKYLMTKCWNNSPSKRPQFSDILAILLRPNNNNR* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1017 589 SUPERFAMILY Protein kinase-like (PK-like) 342 581 IPR011009 -
Lan2g1017 589 PRINTS Tyrosine kinase catalytic domain signature 402 415 IPR001245 GO:0004672|GO:0006468
Lan2g1017 589 PRINTS Tyrosine kinase catalytic domain signature 438 456 IPR001245 GO:0004672|GO:0006468
Lan2g1017 589 PRINTS Tyrosine kinase catalytic domain signature 508 530 IPR001245 GO:0004672|GO:0006468
Lan2g1017 589 PRINTS Tyrosine kinase catalytic domain signature 552 574 IPR001245 GO:0004672|GO:0006468
Lan2g1017 589 MobiDBLite consensus disorder prediction 1 21 - -
Lan2g1017 589 Pfam Protein tyrosine and serine/threonine kinase 366 580 IPR001245 GO:0004672|GO:0006468
Lan2g1017 589 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 585 - -
Lan2g1017 589 Gene3D Transferase(Phosphotransferase) domain 1 340 585 - -
Lan2g1017 589 ProSiteProfiles Protein kinase domain profile. 271 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g1017 589 PANTHER SERINE-THREONINE PROTEIN KINASE 1 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1017 Lan-Chr2 21225424 21229223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1017 312 581 MAP Kinase Kinase Kinase AT2G17700 32.740 4.09e-51 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Lan2g1017 PK_Tyr_Ser-Thr 1.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1017 - - gmx:100801110 947.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1017 2 21225424 21229223 Lan2g1017 2 21225424 21229223 ECH
Lan2g1017 2 21225424 21229223 Lan9g1211 9 19438304 19442325 LSH
Lan2g1017 2 21225424 21229223 Lan2g1017 2 21225424 21229223 PCT
Lan2g1017 2 21225424 21229223 Lan9g1211 9 19438304 19442325 PCT
Lan9g1211 9 19438304 19442325 Lan2g1017 2 21225424 21229223 PCT