Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0999 ATGCCATCAATTTCCGCTAATTCATCTCCTCAGAAACGCGTATTGAGATCTCACGCTGCGGCGTTGAAGGTTCTGATCACTTCCCCGTCGGGACCTACACTTCCGTCACGGTGCAGGAATTCGATTCCCTTCACTTCTCTTACTAAAAATGATGTTGTTTCGATTCGTTCTGGTGATAAACAAGCTGAATCGGATTGTGTTGCTCCAAAACCGGAACGTGATCCGATAGTAGCCACTGCTTTGGATTCCACTCCTCAGAAGCATAAAGTAAGATCTCGTGCGGTATTGGAGGCTTCAACATTACCCCCTGCAACTCATTCACCATCCAAATGGAAATCACAGAGACGGTGCATCAGTGCAAGCCCGCACACTTCTCTAACTGAAAGCAAGGTTGATTCAGTTTGCGGTGGTGATGCACAAGCTAAAGGCAAACTTAAATGGAATCCCAATGATGGTGAGCAATTGAGAGTGGTGAAGGAGGCATTGCACGTGTCCACTGAACCTTCTAGAATTGCATGCCGTGAGGATGAGCAGAATACAGTTTTGGAGTTTTGTAAGGCATGTGTTGAGCAAGAGAAGGCTGGAAGCTTGTACATTTGTGGATGTCCGGGAACAGGAAAATCATTAACTATGGAGAGAGTGAAAGGGCTCTTACTTAATTGGGCTACAGAGGCAGGCTTCGTGCGCCCAGATGTTTTATCTGTAAACTGTACTTCCTTTGTCAACACATCTGACATTTTCACCAAGATACTTGAGTTAAACCAATCACCTGGGAAAAAGATTTCAGCAACACCCTTAAGACAACTCCAGAACATGTATTCTCAAAAGTCGTCTAGAAATAACATGGTATTGATACTTGCTGATGAGTTAGATTATCTAATAACCAAAGATAGGGCTGTGCTCCATGATCTTTTCATGCTCACCACCTTACCATTTTCCAGGTGTATTTTAATAGGGATAGCAAATGCAATTGACCTAGCTGATCGTTTTCTTCCAAGGCTTGCATCATTAAGCTGCAAGCCTATTGTTGTAACTTTTCGGGCCTACTGTAAAGATCAGATCCTTAGGATTCTACAAGAAAGACTAAGCGAGCTTCCTTACATTGTCTTCCAACATCAAGCACTAGAACTCTGTGCCAGGAAAGTTGCTGCAGCTTGTGGAGATATGCGGAAAGCCCTTTGCATATGCAGGAGTGCGATAGAGATGCTAGAAGCTGAGATTAGAGAATCTACCAGCAAGTCAAATACTTCATTGGAAGAGAAAGCATCATCTGAACAAAAGACCACCACAACTTCTGATCATATGAAGAAACATGAGTTTGATACTGTAAGGATTGATCATATGGCTCTTTCCTTGTCAAAGACATACAGGTCACCAGTGGTGGACACAATACAATCTCTTCCGCTTTATCAGCAGATTGTACTCTGCTCTTCCATGAAACATTTCCGTGGAACTAAGAAAGAAACAATCCTTGGCGAGTTGTATAAATCTTACATGGGAATATGCAAATTGTCACAAATTCAACCGGCTGGGTTCTTGGAATTTTCAGATATGTGCAGAGTGCTAAATGACCAGGGGCTTATTAAACTAGGACAATCGCGGGAGGATAAATTGAAAAAGTTGACACTAAAAGTAGATGAAGCTGATATTACTTTTGCACTGCAGGGAATCCGTTTTTTTCAAAACTGTATCCAATGA 1698 0.424 MPSISANSSPQKRVLRSHAAALKVLITSPSGPTLPSRCRNSIPFTSLTKNDVVSIRSGDKQAESDCVAPKPERDPIVATALDSTPQKHKVRSRAVLEASTLPPATHSPSKWKSQRRCISASPHTSLTESKVDSVCGGDAQAKGKLKWNPNDGEQLRVVKEALHVSTEPSRIACREDEQNTVLEFCKACVEQEKAGSLYICGCPGTGKSLTMERVKGLLLNWATEAGFVRPDVLSVNCTSFVNTSDIFTKILELNQSPGKKISATPLRQLQNMYSQKSSRNNMVLILADELDYLITKDRAVLHDLFMLTTLPFSRCILIGIANAIDLADRFLPRLASLSCKPIVVTFRAYCKDQILRILQERLSELPYIVFQHQALELCARKVAAACGDMRKALCICRSAIEMLEAEIRESTSKSNTSLEEKASSEQKTTTTSDHMKKHEFDTVRIDHMALSLSKTYRSPVVDTIQSLPLYQQIVLCSSMKHFRGTKKETILGELYKSYMGICKLSQIQPAGFLEFSDMCRVLNDQGLIKLGQSREDKLKKLTLKVDEADITFALQGIRFFQNCIQ* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0999 565 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 410 IPR027417 -
Lan2g0999 565 CDD AAA 177 347 - -
Lan2g0999 565 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 7 563 - -
Lan2g0999 565 SMART Cdc6_C_2 475 554 IPR015163 -
Lan2g0999 565 Pfam AAA domain 192 307 IPR003593 -
Lan2g0999 565 MobiDBLite consensus disorder prediction 411 425 - -
Lan2g0999 565 Pfam CDC6, C terminal winged helix domain 475 553 IPR015163 -
Lan2g0999 565 CDD Cdc6_C 468 550 IPR015163 -
Lan2g0999 565 Gene3D - 339 439 - -
Lan2g0999 565 PANTHER CELL DIVISION CONTROL PROTEIN 6 HOMOLOG 7 563 - -
Lan2g0999 565 SMART AAA_5 193 340 IPR003593 -
Lan2g0999 565 PIRSF Cdc6 27 565 IPR016314 GO:0006270|GO:0051301
Lan2g0999 565 Gene3D - 460 554 IPR036388 -
Lan2g0999 565 MobiDBLite consensus disorder prediction 411 436 - -
Lan2g0999 565 Gene3D - 151 338 IPR027417 -
Lan2g0999 565 SUPERFAMILY "Winged helix" DNA-binding domain 460 563 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0999 Lan-Chr2 21023406 21029708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0999 77 564 Core DNA Replication Machinery Family AT2G29680 57.115 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0999 K02213 - gmx:100791200 677.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g0999 2 21023406 21029708 Lan2g0999 2 21023406 21029708 ECH