Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0985 ATGGCAAAAATCGGTTTGAAGATGGGTTACTTATGTGATTTTTGTGGAGATCAAAGGCCCGTGGTATACTGCCGCTCTGATGCTGCATGCTTATGTTTGTCTTGTGATCGAAATGTTCATTCGGCTAATGCTCTTTCGAGGCGTCACTCGAGGACCCTTTTATGTGAGAGGTGTAACTCACAACCTGCATTTGTTCGGTGTACTGAAGAGAACATTTCACTTTGTCAAAACTGTGATTGGCTGGGTCATGGTACCACAACATCTTCTTCAACACGTAAGAGGCAAACAATCGATTGCTACTCCGGCTGCCCTTCATCGGCAGAACTTTCTTCTATATGGTCTTTTTTCTCAAATATTCCCTCTATAGGCGAAGCGTGTGAGCAGGAACTGGGTTTAATGAGCATTAATAAGAACAGCAACAATAGTACTTGGGTTCCTTCAGAAAGCCGGAATGTGTCTGGTTCAGCACAAGTGTCTGATCTATCCAGCAAGGATAAATCCTTGTTTGGTATATCTTCAATGCCTGAGTCAAGCTCAAAACCTCGTCTTCTGGACCAACTGCCAGAATCTATCGATGAATGTATTCCAAAGTTAAACTTCTCCGGTAAAAAATCTCCTGGGATATTTGAAGATGGTGATCTGTATGATAATTTCAACATGGACGAAGTAGATCTAGATCTTGAAAACTATGAGGAACTTTTTGGTATGACTCTGAGTCATTCGGAAGATCTTTTTGAAAATGGTGGGTTTGATAGCTTGTTTATGACAAAGGAAATGTCTGCTAGTGCTGGTGATTCCAATTGTCAAGGTGCTGTTGCTGCAGAGGGATCATTTGTTGGGTTGGTCAATGTGGTGCAACCAGCATACAGCAATGCTGCATCTACAGATTCGATGTTCAGTTCTAAAACTGAACCGATTCTTTGTATCACGGGAAGGCAATCCCAATCAAACATTTCATTTTCGGGCATATCCAAAGATAGTGGTGCTGGTGACTACCAAGACTGTGGGGTTTCTTCAATGCATCTGATGGGAGAGCCTCCCTGGTGTCCTCCTTGCCCCGAGAGCTCTCTGCAATCTGCTACCCGCAGCAATGCTGTCATGCGTTACAGAGAAAAGAGAAAGGCACGAAAGTTCGATAAAAGAGTAAGGTATGTCTCTCGCAAGGCCAGGGCTGATGTCAGAAAGCGTGAGAAGGGACGGTTTGTGAAAGCTGGTGATGTTTACGACTATGACCCGTTGAGCGAAACCAGAAGCTACTGA 1260 0.4389 MAKIGLKMGYLCDFCGDQRPVVYCRSDAACLCLSCDRNVHSANALSRRHSRTLLCERCNSQPAFVRCTEENISLCQNCDWLGHGTTTSSSTRKRQTIDCYSGCPSSAELSSIWSFFSNIPSIGEACEQELGLMSINKNSNNSTWVPSESRNVSGSAQVSDLSSKDKSLFGISSMPESSSKPRLLDQLPESIDECIPKLNFSGKKSPGIFEDGDLYDNFNMDEVDLDLENYEELFGMTLSHSEDLFENGGFDSLFMTKEMSASAGDSNCQGAVAAEGSFVGLVNVVQPAYSNAASTDSMFSSKTEPILCITGRQSQSNISFSGISKDSGAGDYQDCGVSSMHLMGEPPWCPPCPESSLQSATRSNAVMRYREKRKARKFDKRVRYVSRKARADVRKREKGRFVKAGDVYDYDPLSETRSY* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0985 419 Pfam CCT motif 362 404 IPR010402 GO:0005515
Lan2g0985 419 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 8 419 - -
Lan2g0985 419 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 9-LIKE 8 419 - -
Lan2g0985 419 ProSiteProfiles Zinc finger B-box type profile. 7 54 IPR000315 GO:0008270
Lan2g0985 419 CDD Bbox1_BBX-like 11 54 - -
Lan2g0985 419 ProSiteProfiles CCT domain profile. 362 404 IPR010402 GO:0005515
Lan2g0985 419 CDD Bbox1_BBX-like 54 97 - -
Lan2g0985 419 SMART bboxneu5 7 54 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0985 Lan-Chr2 20922292 20926639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0985 8 419 C2C2-CO-like Transcription Factor Family AT3G07650 53.756 1.05e-146 420
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Lan2g0985 CCT 1.9e-14 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0985 - - gmx:100783016 645.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g0985 2 20922292 20926639 Lan9g1174 9 19160356 19164647 LSH