Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0970 ATGGAAACTTTTGATCGTAATTCAAACCAATATGCTACCATTTCTTCTAATTCATCATCAGCATCATCTTCTGGAGGTGTTAATAGTAATAGTAATGATAACAATGCTAATAGTGGTAGCAGTTCTGGCATTGTAAACTGGTATGGTGTGAATTTGCCTTCTGTGAGAACTTTGCGTTCTCCACTTTCCTATTTGTTGGAGCACTCTGGTATCATAACCTCAGGTCCTCCTTCTGAGGCTGTAATTGTCAACAATGGAGTTACGGGTTCGGTGTTACGGTCTCGGCTTCAAGCTCAATCACTTGATGGTGGTGGTGGTGGTGTTGGAACACCCTGCACGAATAGCGCTGGTGAAGTTGCAATAAGGATCATTGGAGCTGGAGAGAATGATCACAATGTGGTAGGGTCTCGTACTCCTTCATCGTCGTCATGGAATCGGCGTGGAGAAGTTGGTTATGGTGGTTATGATGATGTGGTTAGTGGTAGAAATGGAATGCCTGGGTTGGTTGATAGCGGTGGTGGTGAGGATCATGGTGGAATTGCTGCTGCCCAGAGGGTTCCTCGGGTTTCTTCGTCTTCGTCATTAGCTGGTAGTGGACAAGTTGGTGGGGATGCTACTGGGAATGGGTTAGAAAGTAACGGTAGGGAGTCGTCATCCTATCAGAGGTATGATATTCAGCAGATAGCGAAGTGGATTGAGCAGATTCTTCCTTTCTCACTCTTGCTGTTTGTTGTTTTCATCCGTCAGCATTTGCAAGGTTTCTTTGTCACAATTTGGATATCAGCTGTGATGTTCAAGTCAAATGAAATTGTTAAGAGGCAGACAGCTTTAAAGGGAGATAGGAGAGTATCTATCCTTGCTGGTATCTCAGTTGCCTTCATGCTTCATGTGATGTGCATTTACTGGTGGTATCGAAATGATGATCTTTTATACCCGCTTGTCATGATTCCTCCAAATGCAACACCTTTCTGGCATTCAATATTCATCATTTTGGTTAATGATACATTGGTGCGACAAGCAGCAATGGCTCTCAAGTGTTTTCTGCTTATATATTACAAAAATGGCAGAGGTCATAACTACCGTCGGCAGGCTCAAATGTTGACTCTTATTGAGTACACATTGTTGTTGTATCGTGCCATGTTGCCAACACCAGTTTGGTACCGGTTTTTCCTGAACAAGGATTATGGCAGTCTCTTTTCGTCACTGACAACTGGGTTGTATTTAACTTTCAAGCTAACCTCTTTTGTTGAGAAGGTTAAATGCTTTTTTTCTGCCATGAAAGCATTATCAAGAAAGGATGTTAACTATGGGGTTTGTGCCACAATGGAACAGGTTAATGCTGCTGGTGACCTATGTGCTATATGTCAAGAGAAGATGCATGCCCCCATCTTGTTGCGCTGTAAACACATTTTTTGCGAAGAGTGTGTATCAGAATGGTTTGAGAGAGAAAGGACTTGCCCACTATGTAGAGCATTGGTAAGACCAGCTGATCTGAAAACCTTTGGAGATGGATCTACAAGTCTACTTTTCCAATTGTTTTAA 1542 0.4261 METFDRNSNQYATISSNSSSASSSGGVNSNSNDNNANSGSSSGIVNWYGVNLPSVRTLRSPLSYLLEHSGIITSGPPSEAVIVNNGVTGSVLRSRLQAQSLDGGGGGVGTPCTNSAGEVAIRIIGAGENDHNVVGSRTPSSSSWNRRGEVGYGGYDDVVSGRNGMPGLVDSGGGEDHGGIAAAQRVPRVSSSSSLAGSGQVGGDATGNGLESNGRESSSYQRYDIQQIAKWIEQILPFSLLLFVVFIRQHLQGFFVTIWISAVMFKSNEIVKRQTALKGDRRVSILAGISVAFMLHVMCIYWWYRNDDLLYPLVMIPPNATPFWHSIFIILVNDTLVRQAAMALKCFLLIYYKNGRGHNYRRQAQMLTLIEYTLLLYRAMLPTPVWYRFFLNKDYGSLFSSLTTGLYLTFKLTSFVEKVKCFFSAMKALSRKDVNYGVCATMEQVNAAGDLCAICQEKMHAPILLRCKHIFCEECVSEWFERERTCPLCRALVRPADLKTFGDGSTSLLFQLF* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0970 513 ProSiteProfiles Zinc finger RING-type profile. 452 490 IPR001841 -
Lan2g0970 513 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 19 513 - -
Lan2g0970 513 MobiDBLite consensus disorder prediction 192 216 - -
Lan2g0970 513 ProSitePatterns Zinc finger RING-type signature. 467 476 IPR017907 -
Lan2g0970 513 SMART ring_2 452 489 IPR001841 -
Lan2g0970 513 Pfam Zinc finger, C3HC4 type (RING finger) 450 492 - -
Lan2g0970 513 MobiDBLite consensus disorder prediction 1 38 - -
Lan2g0970 513 CDD RING-HC_RNFT1_like 451 490 - -
Lan2g0970 513 SUPERFAMILY RING/U-box 443 495 - -
Lan2g0970 513 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 19 513 IPR044235 GO:0061630|GO:1904294
Lan2g0970 513 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 429 499 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0970 Lan-Chr2 20682998 20689090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0970 58 513 C3H Transcription Factor Family AT5G01960 60.217 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0970 - K22379 nnu:104612968 575.859