Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0962 ATGGAGAAGATTCAACAACCCTTCTCTTCCGATCCCAATTCCCGCGACACCTCTCCCACTTCACGCGATGTTGTTGTCGACAACAGCAACAACAACAACAACAACTCTTCATTCGATGAGCCTCATTCCGCCACCGCCACCTACAAGGTCAAATTCATCTGCAGCTACGGCGGCAAAATTCATCCGCGTCCTCATGACAACCACCTCTCCTACGTCGGCGGCGACACCAAAATCCTCGCCGTCGATCGCAATATCAAATACTCTGCTTTCATGACCAAAGTCTCTTCCCTCGCGAACAATGCAAATCTCTGCTTCAAGTATCAACTCCCTGGTGAGGATCTCGACGCTCTTATTTCCGTTACCAATGATGAAGATCTCGATAACATGATGATCGAGTATGATCGTGTCTCACGCGCTTCTCCTACGAAACCTGCGAGAATGAGGCTCATTCTGTTTCCTCTCATCAACAATGCGGTTTCTGGTTCTTCTCCGGTTCAGAATTTCGGTCCAACTGAACCGAAACCGGAGCGTCAGTGGTTCGTTGACGCGCTCAATTCGGTTCAGATTCCGAATCTAGAACGTTCTTCTCCGCCGCAGAATCCGGATTTTCTGTTTGGATTTGATAAAGTGTATCCAAAACCGCCAGACCCGGCGCCATCACCGAAGGATTCGGATTTCGCGGCGAAGGATTCAGAGTGTGGGCCCGAGGAGAGAAAAGCGGTTGAAGAAAACGATGCTGCTGCTGTTGCTTCTAATCAGAAGCAGATCCAAGAGGAGTTACAGAAAATGCAGATTGCAAACAACAACAATGAACAACAGCAACAGCAGCAACAACAACAGCAAGTGCTTCTTCATCAGTTGAACGAAGAAAACGTTGTGGACTGTTACACTCAGAAGAATCCAGAAAAGGTGACTCCATTACCTGCAAATTCTCATTTGCAGGTTCATCCTGGTCCGGTTCATGCTTCTTTTTTGCCAAGTAGTGGTTATCCTGAACAGGTTTATCTGATTCAAACCGCGTCCGGTTTATATCAAGCGATTCGGCCTGTGACTGTAACTGCTGCACCATTGGGGCCTACTTACTATGCTATGCCAAGGATGGTTCCGGCGTCGAGTATTGCTGGTGCTGGTCTTGCTTACAATGGTGGTTCACAGGTTGGGGTGGTGAATGAGAATGGCTATTCACAGGTTGGGGTTCAACATTTGCCTGAGAGGTCTGTTGGTTGGAATTGA 1233 0.4809 MEKIQQPFSSDPNSRDTSPTSRDVVVDNSNNNNNNSSFDEPHSATATYKVKFICSYGGKIHPRPHDNHLSYVGGDTKILAVDRNIKYSAFMTKVSSLANNANLCFKYQLPGEDLDALISVTNDEDLDNMMIEYDRVSRASPTKPARMRLILFPLINNAVSGSSPVQNFGPTEPKPERQWFVDALNSVQIPNLERSSPPQNPDFLFGFDKVYPKPPDPAPSPKDSDFAAKDSECGPEERKAVEENDAAAVASNQKQIQEELQKMQIANNNNEQQQQQQQQQQVLLHQLNEENVVDCYTQKNPEKVTPLPANSHLQVHPGPVHASFLPSSGYPEQVYLIQTASGLYQAIRPVTVTAAPLGPTYYAMPRMVPASSIAGAGLAYNGGSQVGVVNENGYSQVGVQHLPERSVGWN* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0962 410 Gene3D - 70 152 - -
Lan2g0962 410 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 7 371 - -
Lan2g0962 410 MobiDBLite consensus disorder prediction 223 244 - -
Lan2g0962 410 MobiDBLite consensus disorder prediction 1 41 - -
Lan2g0962 410 Pfam PB1 domain 66 153 IPR000270 GO:0005515
Lan2g0962 410 CDD PB1_UP2 53 152 - -
Lan2g0962 410 SUPERFAMILY CAD & PB1 domains 65 156 - -
Lan2g0962 410 MobiDBLite consensus disorder prediction 191 245 - -
Lan2g0962 410 PANTHER OS05G0427100 PROTEIN-RELATED 7 371 - -
Lan2g0962 410 Coils Coil 249 290 - -
Lan2g0962 410 SMART PB1_new 64 154 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0962 Lan-Chr2 20597901 20599561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0962 21 210 MAP Kinase Kinase Kinase AT3G46920 37.245 2.78e-29 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0962 - - lang:109338577 776.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g0962 2 20597901 20599561 Lan9g1153 9 18928809 18930358 LSH