Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0950 ATGACAAAAAGCTTTGAAATACCAGAAATGTTCTTGAATCTTCACCAACAACAGTACCAATCTCAATCTCACCTTTTCCATCTCTCCACAGAGTCCCAAACCTCCGAAGAAGGTGACAGCAGCGGCGGGCCCACCCAAAAGCCCGCCTCCTCCAGTGGAGATGGTGGCACTATTGAAGCCGTGCCGAAGCTCAGAGGCCGCCCACCGGGCTCTAAAAACAAGCCCAAGCCACCTGTCATGTTAACTCAAGAGCCCGAGCCCGTTATGAGCCCGTACATTCTAGAAGTACCTGCTGGAAGCGACGTCGTTGAAGCCTTGAAGCGTTTCAGTGTTCGTAAGAACAAGGGCTTATGCATTCTTTCTGGTAAAGGAACCGTTGCTAACGTCACTCTCCGTCAACCTTCTTCTGTCGCTTCAGCCACCACCACCACCACCGCCGTTACTTTTTACGGTCGTTTTGATATTCTGTCAATTTCCGCCACTATTTTCCCCAACTCCTCGATTCCAATCCCTGACGGCTTCTCTATCTCCGTCGCCGGACCTCAGGGCCAGGTCGTCGGAGGATTCGTCGCCGGAAGTTTAATTGCTGCCGGGACGGTGTTCTTGATTGCACTTTCTTTCAACAATATGAGTTATCACAGGCTGCCATCGGAAGTGGACGTGAGAAACAACAATTCAGTTTCTGGTGACGGTGTTGTGCAGTCGCTGCCGGTGTCTGGCGGTGGCGGAGCGGAAAATGGGCACGTGCAGGGTGAGTCTATGTATAGCGGTAACTTACCCTCTGATGTGATTTGGGCTCCAACGGCAATGCCACCACCTTTCTGA 825 0.5188 MTKSFEIPEMFLNLHQQQYQSQSHLFHLSTESQTSEEGDSSGGPTQKPASSSGDGGTIEAVPKLRGRPPGSKNKPKPPVMLTQEPEPVMSPYILEVPAGSDVVEALKRFSVRKNKGLCILSGKGTVANVTLRQPSSVASATTTTTAVTFYGRFDILSISATIFPNSSIPIPDGFSISVAGPQGQVVGGFVAGSLIAAGTVFLIALSFNNMSYHRLPSEVDVRNNNSVSGDGVVQSLPVSGGGGAENGHVQGESMYSGNLPSDVIWAPTAMPPPF* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0950 274 Pfam Plants and Prokaryotes Conserved (PCC) domain 91 209 IPR005175 -
Lan2g0950 274 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 20 273 - -
Lan2g0950 274 SUPERFAMILY AF0104/ALDC/Ptd012-like 89 218 - -
Lan2g0950 274 MobiDBLite consensus disorder prediction 21 84 - -
Lan2g0950 274 MobiDBLite consensus disorder prediction 21 53 - -
Lan2g0950 274 CDD DUF296 91 207 IPR005175 -
Lan2g0950 274 ProSiteProfiles PPC domain profile profile. 86 228 IPR005175 -
Lan2g0950 274 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 20 273 IPR014476 GO:0003680
Lan2g0950 274 Gene3D - 91 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0950 Lan-Chr2 20464768 20465864 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0950 54 274 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 55.983 2.42e-79 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0950 - - gmx:100811053 295.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g0950 2 20464768 20465864 Lan11g0440 11 3236695 3237892 LSH
Lan2g0950 2 20464768 20465864 Lan9g1137 9 18739229 18740228 LSH
Lan2g0950 2 20464768 20465864 Lan15g0558 15 12863003 12864962 PCT
Lan2g0950 2 20464768 20465864 Lan3g0758 3 14165037 14167165 PCT