Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0942 ATGGCACCAAGTTTTGATTGTCTTTCAAGCCTTCTCTGTTTTGAAGATAACAGTATTTTTGATGAAAATGATTATGTGGGTTCAGTGGAGACGTTGGAAGAGGATACTATGTGGTATCCTAGTTATCGTCGAAACCTTAATCAAACTGAGCACTTTGCTGTTGAACCAAATGAGTTTTTGTTGTTGCCATTGCAAAGTGATGAGAGTTTGAATCTGATGGTGGAAAAGGAATGTTATCATTTGCCTCGTGAGGATTATCTCAATAGGGTGAAGAATGGGGATTTGGATTTTGGGGATAGAAAAGAGGCAATTGACTGGATTCAAAAGAAAGATAGAGCTTGGACAATGCAATTGTTGGCTGTGGCATGTTTATCTCTGGCAGCCAAAATTGATGAGACCAAGGTCCCTATGCCTCTAGATTTGCAGGTGGGTGAATCAGACTTTGTATTTGAAGCTAAAATAATACAAAGGATGGAGCTTATGGTACTGAACACATTGAAATGGAGAATGCAGTCAATTACCCCATTCTCCTTCATTGACTATTTCCTTAGCAAGGTCAATGATGATCAAAGTCAAATAAGGTCTTCAATTTTGAGATCCATCCAACTTATACTGAGTACTATAAGAGGTATTGACTTCTTAGAGTTTAAGCCATCAGAGATTGCAGCAGCAGTGGCAATATCTGTGGTGGGGGAAACCAAAACAGTTCACACTGAGAAAGCAATTTCTGTTCTGATTCCACTTGTGGAAAAGGAGAGAGTGTTGAAGTGTGTTAAAATGTTACAAGAGTTGTCATCAAACAATGTCTATGCTGACCATACAAGTGGTTCTTCTGTTCCTGTTCCTGTTCCTGTTCATGTCCCTTGTCTACCCCAAAGCCCAATAGGGGTATTGGATGCAATATGCTTCAGCTACAAAAGTGATGACACAAATAAAAGTGATGATTCAAAGGGTGGTTCATGTGCAAGTTCTCCACATGATAGCCCAAGTGCTAAAAGGAGGAAGCTAAAATAG 1014 0.3955 MAPSFDCLSSLLCFEDNSIFDENDYVGSVETLEEDTMWYPSYRRNLNQTEHFAVEPNEFLLLPLQSDESLNLMVEKECYHLPREDYLNRVKNGDLDFGDRKEAIDWIQKKDRAWTMQLLAVACLSLAAKIDETKVPMPLDLQVGESDFVFEAKIIQRMELMVLNTLKWRMQSITPFSFIDYFLSKVNDDQSQIRSSILRSIQLILSTIRGIDFLEFKPSEIAAAVAISVVGETKTVHTEKAISVLIPLVEKERVLKCVKMLQELSSNNVYADHTSGSSVPVPVPVHVPCLPQSPIGVLDAICFSYKSDDTNKSDDSKGGSCASSPHDSPSAKRRKLK* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0942 337 CDD CYCLIN 114 163 IPR013763 -
Lan2g0942 337 Gene3D - 172 258 - -
Lan2g0942 337 SUPERFAMILY Cyclin-like 156 264 IPR036915 -
Lan2g0942 337 MobiDBLite consensus disorder prediction 309 337 - -
Lan2g0942 337 Pfam Cyclin, N-terminal domain 115 170 IPR006671 -
Lan2g0942 337 SMART Cyclin_C_2 173 282 IPR004367 -
Lan2g0942 337 Pfam Cyclin, C-terminal domain 173 270 IPR004367 -
Lan2g0942 337 SUPERFAMILY Cyclin-like 58 170 IPR036915 -
Lan2g0942 337 Gene3D - 112 171 - -
Lan2g0942 337 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 111 334 - -
Lan2g0942 337 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 109 - -
Lan2g0942 337 PANTHER CYCLINS 1 109 IPR039361 -
Lan2g0942 337 PANTHER CYCLINS 111 334 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0942 Lan-Chr2 20322449 20325224 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0942 65 251 Core Cell Cycle Gene Families AT5G65420 49.315 1.05e-61 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0942 K18810 - gmx:100803873 398.282