Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0932 ATGGATCGCTATGAGATTCTCAAAGATATTGGGTCTGGGAGTTTTGCTGTAGCCAAACTTGTTAGAGACAACTTCAGCAAAGAGTTATTTGCTGTCAAGTTTATTGAGAGAGGCAACAAAATTGATGAGCATGTCCAGAGGGAAATCATGAACCATAGATCATTGAAGCATCCCAATATTGTTAGATTCAAAGAGGTCCTTCTGACTCCAACACATCTTGCCATAGTAATGGAGTACGCGGCCGGAGGAGAACTCTTTGAGAGGATCTCAAATGCTGGTAGATTCACTGAGGATGAGGCAAGATTTTTCTTTCAGCAATTGATATCAGGAGTCAGTTACTGTCATTCAATGCAAATCTGTCATAGAGATCTGAAGCTTGAAAACACACTCTTAGATGGAAGCACTGCGCCTAGAGTCAAAATTTGCGACTTTGGTTACTCAAAGTCATCTGTATTCCATTCACAACCAAAGTCTACGGTAGGAACTCCGGCTTACATTGCACCTGAGGTCCTGACAAGGAAAGAATATGATGGGAAGATTGCTGATGTTTGGTCTTGTGGAGTCACCTTGTTTGTGATGTTATTTGGGGCTTATCCTTTTGAAGACCCAGAGGATCCAAAAGACTTCAGTAAAACCATTGGTAGAATACTTAGTGTCCAGTACTCAATCCCGGATTATGTAAGAGTTGCCACGGAATGTAGACATCTTATATCACAAATATTTGTGGCTAATCCTGAAAAGAGAATATCAGTACCAGAAATTAGAAACCATCCATGGTTTTTGAGGAACTTGCCTATAGAATTAATGGAAGGTGGAAGGTTGGAAAACAATGATGTAAATAATCCATCACAAAGTGATGAGGAAGTCCTGTCCATTATAGAAGAGGCAAGAAAGTCTCTAAGCATTCCAAAGGTTGGTGGTCTTTTTATAGAAGGTAGCATGGATTTGGATGACTTGGATGCTGATGTAGATATTGAAGATATAGAAACAAGTGGTGATTTTGTGTGCCCTCCTCTTTAA 1020 0.4 MDRYEILKDIGSGSFAVAKLVRDNFSKELFAVKFIERGNKIDEHVQREIMNHRSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERISNAGRFTEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVFHSQPKSTVGTPAYIAPEVLTRKEYDGKIADVWSCGVTLFVMLFGAYPFEDPEDPKDFSKTIGRILSVQYSIPDYVRVATECRHLISQIFVANPEKRISVPEIRNHPWFLRNLPIELMEGGRLENNDVNNPSQSDEEVLSIIEEARKSLSIPKVGGLFIEGSMDLDDLDADVDIEDIETSGDFVCPPL* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0932 339 SUPERFAMILY Protein kinase-like (PK-like) 1 271 IPR011009 -
Lan2g0932 339 Gene3D Transferase(Phosphotransferase) domain 1 80 266 - -
Lan2g0932 339 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Lan2g0932 339 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g0932 339 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Lan2g0932 339 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g0932 339 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g0932 339 PANTHER SERINE/THREONINE-PROTEIN KINASE SAPK1 2 332 - -
Lan2g0932 339 CDD STKc_SnRK2 3 259 - -
Lan2g0932 339 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Lan2g0932 339 PANTHER SERINE/THREONINE KINASE 2 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0932 Lan-Chr2 20116646 20120582 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0932 3 279 CBL-interacting serine-threonine protein kinases AT4G24400 41.404 7.76e-68 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lan2g0932 Pkinase 2.7e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0932 K14498 - gmx:100793276 600.127