Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0904 ATGACCGTTATGTTTTTCGAACGTGAAGTTGGTGGTATGCAGGGAATGTCAGTTCCGACTGATTTTCCGGTTCCGGTGACCACCGGACCGGGGATTTCTGAGCAATTCGGTGCTGCTGTTGAAATTGATTACTTTACACAGGCGAGAAAGGCGCTTAGTGAGCAGTGTCCTTCCGAGGATAAAGATGAGAATTGGAGTCTCACAAAAGCTACCCTGCCTAGTGGTCTGGCTGCCTTGTTGAACCAAGGCTCTGATAACCATAAGAAGCGCCGAAAGAAGTCGCGTTCTGGTGTGGAGAAGGAAAAGTTAAGTGGTGGTTGTGGTTCGAACATTTGGACTGAAACTGAAGGGTACTTCAGGGATTTGACATTGGCTGATATTGATACCTTGTTGGAGTTATCGTCTTTGCGTTGTAGTTCAGTTGATAGTGAGTATATTTCCATTCCAGTTATTACTGAAAATGACCCAAGGGTCAATGTAGTTGTTAGTAGTGAGAATGAAAAGGGGAATGGTCAAAATCTAGATATTGTGGTTGTGAAAAATGAGGATGTTTTTTTTGGAGTTGACAGTGTTAATGACAAAGTTGACAGTGTTAGTGACAAAGTTGACAGTGTTAGTGACAAAGTTGACAGTGTTGGTGACAAAGTTGACAGTGTTAGTGACAAAGATCATGCTACTTATGATAGTTCTGGATGTGCTGCTAGTTTAGAGTGGCTGTTAGGTTGTAGGAATAAGGCGTATCTAACTTCTGAGCGCCCGTCAAAGAAAAGGAAGCTTTTGGGTGGTGATGCTGGGTTGGAGAAATTTTTATTTACTATCCCTAGTGATGGGAACTTATCTTATTGTCATTATTGTGGCTGGGGAGATTTGGGTTTAGTGTCTAATCATTTACTTGTCTGTGGTTCTTGTAAAGTTGCGGTTCATAGGAAGTGCTATGGTGTGTTGGGTGATGTGCATTGTGAGTCTTGGTTCTGTTCGTGGTGTGAGCAAAAAGATGAAGTCAGTGGAATGGTGAATCCTTGTGTTCTTTGCCCCAACAAGGGCGGGGCTTTGAAACCTGTTAGTAGAAGTGGGGAAGGTGTTGAGTGGGTCCAGTTTGCTCATTTGTTTTGTTGCCTGTGGACACCTGAAGTTTATGTGGATGATTTGAAGAAGATGGAGCCTATTGCGAATGTGGATGGGATCGAGGAAAGCAGGAGAAAATTAGTATGTAATGTTTGCAAGGTGAAGTCTGGTGCATGTGTTCGGTGTAGCAATGGGTCCTGCCGGATTTCTTTCCATCCTTTATGTGCAAGGGAAGCTAGACAACGTATGGAGGTTTGGGCGAAGGATTGTTCCGATAATGTTGAGTTGCGGGCTTTTTGCTTTAAGCACTCAGATCTACAAGAGAACAGCAGCATCTTGCCCTCAGGAAATTCAGTTGTTGTTAGAAGTGAATTTTCTGATGCCAATGGCCTTCAAGTGAGATTGCCAGTGAACAATGAATACAATTTAAAAAGTGGTTGCAGGAACGGAGATAACCTTGGGATAATTTCTGATGATCGTCCATACAAATTGAGCCATAATGAACCAGAAGATGGTGGGTTGTCTAATAGTCGGTTAAATTCTCACAACATATCTGGGTGTGATGCTGTTCGGCAACTGTATAATACTGAGACGGTGGGTAGGACTAATGAGAATGCTAATGCATCTGATACCCTCAAATATGCACTTGTTTGGAAGAAGTTGATAGAGAAAGGGAAAATTGATGTGAAAGATGTAGCTCTGCAGATTGGCATTTCTCCAGAGGCACTAACTCCAAATATATATGAGGCTTGCATGTCCCCTGATGTGCGACTCAAAATAGTCAATTGGTTAAAAGCCCATGTATATACCAATGCAATGCATAAAAGTTTGAAAGTCAAATTCAAATCAATCAATTCATCCAAGGATGAAGAGGGAGCAACTGATGCTTCACTGATATCCGATCCAGGTTTTCTGGATCTGGCCAGTTTTAAGTCTGTACCACGAAGGAGAGTAACTGTCAGCAGCATTAGGATTTTGAAGGATACTGAAATGATATGTTCATCTGAGGCAGTTTCTAGTGATAATGGGTTGCCATTGGACAAGTTAATTGTAGCTGAACCTAACTGTGAAAATCCAGGAACCTTCAATGAAGCATCCATTCCTGATGTAACTGAAAAGAATTTAACTATGTCTGAGGATACTTTATCTGAAATTCAAGGCAAGGCTCATCAAACCGACAAAAGCAGCTTAACTGAATGCATTTCAGATGAGAAGTTGACTTTATGTTTGCTGAGAGCTTCTGTGCTTTCTGAGCAGCACCTTCCTGTCTGTTCTAATTCAGAAGTACCTGATTCTGGTTCCACAAGGATAGATGCAATCTCTAGTTACATTCACCCATACATCAGCAAGGAAGTGCATCACATTCATAATCGGGTGCTTTCAAAGGATATTATATGTCCAAGGGGGGATGGAAATTGTTCTTGGGTTGAATCCTTGAGGGCCAGTAAGCAGTATCAGCATTTAACTTGCCTTGATGATTGCAAGTCTGATCAAGTGAATATGAAGCAGTTGGTTAGGGCTGGAGAAATGGGCGTTTTGGAAAATTCTCTAGAAGATGAAGTGGAGGGGGAACTTATATATTTTCAGCATAGGTTATTGCAGAATGCAGCTAGAAGAAGGCAGATTGCTGATAACTTAATCTTCAGTGTTACCAAGAGTTTGCCGCGGGAAATTGATACCACACATCAGCAAAGGTGGGATGCTGTGCTTGTTAATCAATACATGTTTGATCTTAGGGAGGCAAAAAAGAGGGGCAGAAAAGAGAGAAAACACAAGGAAGCACAAGCAGTTCTAGCTGCTGCAACTGCTGCTGCCGCATCTCCTAGGGTTTCTTCTCTCCGGAAAGACTCTTTATTGGAATCTGTGCAACAGGAGAGTTTGATAAAGTTGGAAACATTAAGTCAGAGGGATGGTGTTTGTTCTCAGCCTTTGCCACGTGCCAAAGATACACTTTCAAGACTAGCTGTAACTAGGACTTCATCAGAGAAATATTCAGATTTTGGCTTGACATCTTCAAATCTTTCTATTGAACATCCTACATTGTGTGATATATGCAGACGACCTGAGACATTGTCAAGACCTATTCTACTTTGCTCTGGTTGCAAGGTTGCAGTTCACTTGGATTGCTATAGTGGTGTGAAAGAAACTACACGCCCCTGGTACTGTGAATTATGTGAAGATTTATCGTCTAGAACCTCTGGGGCATCTGCTATAAATTTTGCAGAGAAGCCTTATTTTATTGCTGAGTGTGCTCTCTGTGGTGATACTAATGGTGCTTTTAGAAAGTCTTCTGATGGCCAATGGGTCCATGCCTTCTGCGCTGAGTGGGTTTTTGAGTCGACATTCAAAAGAGGACAGGCAAATGCTGTTGATGGGATGGATAATGTATTGAAAGGAGTTGATATTTGTTGCATCTGCCGCCACAAGCATGGTGTATGCATTAAGTGTAACTTTGGCAATTGTCAGACCAAGTTCCATCCATCCTGTGCTAGAAGTGCTGGTTTGTACATGAATTTGAGCAGTGCACCTAGCAAGCCACATCACAAGCCACAACACAAGGCTTACTGTGAAAGACACGGTTCCGAGCAGAGGGCAAAGGCTGAAGCTCAAAAACATGGGATAGAAGAGTTAAGAAACTTGAGGCAAATTAGGGTGAGAGAAAGACTACGTCTCCTTTGCGAAAGAATTGTCAGGCGGGAAAAAATTAAGCGGGAATTGGTTCTCTGCTCACAAGACATGCTTGCCTTTAAAAGAGATCATGTTTCTAGGTCTGTGCTACCTCAAAGCTCTTTCATCCTTCCTGGTAGGAGTTCAGAATCGACTACAACATCCCTTAAAGTGATCACAGAGGGAAACAGATTATGCAGTGAAGTAGTTCAAAGATCAGATGATGTAACAGTGGACAGCTCAGTTTCTGACGAACACCATAGATTTGTTGTATCCATGGATACTGACCCAAAATTGGATGATGTCTGCTCAACCTCACATAGCCATTATAACCATAAGATTGCCGAGAGTGTGCAATATACTGGCAAGCAGATTCCTCACAGAGCTTCTGCCATATCACATAATTTGGACGATGGTGGGTGGAGATCAAAATCAAGAAAGTTACAGCATGCAGAGACATTTGGAAAAGAGCTCGTTATGACGACAGATGAAGCATCTATGAAGAACTCAATGTTACCTAAAGGGTATGCCTATGTTCCTGCCGATTGCTTGTCAAATGATGACATGCAGTCTAACCAGGATGTAGATGCTAATGGATCAGTGGAACACGATGGGTAG 4350 0.4228 MTVMFFEREVGGMQGMSVPTDFPVPVTTGPGISEQFGAAVEIDYFTQARKALSEQCPSEDKDENWSLTKATLPSGLAALLNQGSDNHKKRRKKSRSGVEKEKLSGGCGSNIWTETEGYFRDLTLADIDTLLELSSLRCSSVDSEYISIPVITENDPRVNVVVSSENEKGNGQNLDIVVVKNEDVFFGVDSVNDKVDSVSDKVDSVSDKVDSVGDKVDSVSDKDHATYDSSGCAASLEWLLGCRNKAYLTSERPSKKRKLLGGDAGLEKFLFTIPSDGNLSYCHYCGWGDLGLVSNHLLVCGSCKVAVHRKCYGVLGDVHCESWFCSWCEQKDEVSGMVNPCVLCPNKGGALKPVSRSGEGVEWVQFAHLFCCLWTPEVYVDDLKKMEPIANVDGIEESRRKLVCNVCKVKSGACVRCSNGSCRISFHPLCAREARQRMEVWAKDCSDNVELRAFCFKHSDLQENSSILPSGNSVVVRSEFSDANGLQVRLPVNNEYNLKSGCRNGDNLGIISDDRPYKLSHNEPEDGGLSNSRLNSHNISGCDAVRQLYNTETVGRTNENANASDTLKYALVWKKLIEKGKIDVKDVALQIGISPEALTPNIYEACMSPDVRLKIVNWLKAHVYTNAMHKSLKVKFKSINSSKDEEGATDASLISDPGFLDLASFKSVPRRRVTVSSIRILKDTEMICSSEAVSSDNGLPLDKLIVAEPNCENPGTFNEASIPDVTEKNLTMSEDTLSEIQGKAHQTDKSSLTECISDEKLTLCLLRASVLSEQHLPVCSNSEVPDSGSTRIDAISSYIHPYISKEVHHIHNRVLSKDIICPRGDGNCSWVESLRASKQYQHLTCLDDCKSDQVNMKQLVRAGEMGVLENSLEDEVEGELIYFQHRLLQNAARRRQIADNLIFSVTKSLPREIDTTHQQRWDAVLVNQYMFDLREAKKRGRKERKHKEAQAVLAAATAAAASPRVSSLRKDSLLESVQQESLIKLETLSQRDGVCSQPLPRAKDTLSRLAVTRTSSEKYSDFGLTSSNLSIEHPTLCDICRRPETLSRPILLCSGCKVAVHLDCYSGVKETTRPWYCELCEDLSSRTSGASAINFAEKPYFIAECALCGDTNGAFRKSSDGQWVHAFCAEWVFESTFKRGQANAVDGMDNVLKGVDICCICRHKHGVCIKCNFGNCQTKFHPSCARSAGLYMNLSSAPSKPHHKPQHKAYCERHGSEQRAKAEAQKHGIEELRNLRQIRVRERLRLLCERIVRREKIKRELVLCSQDMLAFKRDHVSRSVLPQSSFILPGRSSESTTTSLKVITEGNRLCSEVVQRSDDVTVDSSVSDEHHRFVVSMDTDPKLDDVCSTSHSHYNHKIAESVQYTGKQIPHRASAISHNLDDGGWRSKSRKLQHAETFGKELVMTTDEASMKNSMLPKGYAYVPADCLSNDDMQSNQDVDANGSVEHDG* 1450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0904 1449 ProSiteProfiles Extended PHD (ePHD) domain profile. 338 459 IPR034732 -
Lan2g0904 1449 SMART PHD_3 1036 1081 IPR001965 -
Lan2g0904 1449 SMART PHD_3 1157 1215 IPR001965 -
Lan2g0904 1449 SMART PHD_3 403 459 IPR001965 -
Lan2g0904 1449 SMART PHD_3 281 329 IPR001965 -
Lan2g0904 1449 ProSitePatterns Zinc finger PHD-type signature. 1037 1080 IPR019786 -
Lan2g0904 1449 Pfam PHD-finger 295 329 - -
Lan2g0904 1449 Pfam PHD-finger 1049 1081 - -
Lan2g0904 1449 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1102 1217 IPR013083 -
Lan2g0904 1449 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 337 461 IPR013083 -
Lan2g0904 1449 PANTHER PHD FINGER PROTEINS 96 467 - -
Lan2g0904 1449 PANTHER PHD FINGER PROTEINS 751 1438 - -
Lan2g0904 1449 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1013 1090 IPR013083 -
Lan2g0904 1449 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 273 336 IPR013083 -
Lan2g0904 1449 ProSiteProfiles Zinc finger PHD-type profile. 1034 1083 IPR019787 -
Lan2g0904 1449 SUPERFAMILY FYVE/PHD zinc finger 1025 1081 IPR011011 -
Lan2g0904 1449 ProSiteProfiles Extended PHD (ePHD) domain profile. 1102 1215 IPR034732 -
Lan2g0904 1449 MobiDBLite consensus disorder prediction 81 104 - -
Lan2g0904 1449 SMART c1_12 1020 1077 IPR002219 -
Lan2g0904 1449 SMART c1_12 267 320 IPR002219 -
Lan2g0904 1449 Pfam PHD-zinc-finger like domain 340 458 - -
Lan2g0904 1449 Pfam PHD-zinc-finger like domain 1104 1214 - -
Lan2g0904 1449 PANTHER PHD-FINGER DOMAIN CONTAINING PROTEIN FAMILY-RELATED 96 467 - -
Lan2g0904 1449 PANTHER PHD-FINGER DOMAIN CONTAINING PROTEIN FAMILY-RELATED 751 1438 - -
Lan2g0904 1449 ProSiteProfiles Zinc finger PHD-type profile. 279 331 IPR019787 -
Lan2g0904 1449 SUPERFAMILY FYVE/PHD zinc finger 272 330 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0904 Lan-Chr2 19618627 19628690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0904 295 479 C2H2 Transcription Factor Family AT3G14740 29.947 2.98e-16 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Lan2g0904 zf-HC5HC2H_2 7e-24 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0904 - - gmx:100775631 1596.25