Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0897 ATGGAAAATGAGGACCAAAATGGTGAGGGTAGATTGAGCATGATTCGTAAGATGAAACCTTACCTTGCTATGGTATCCCTTCAGTTTGGTTATGCTGGAATGTATATCATTACGATGGTTTCCTTCAAACATGGTTTGAGCCATTGGGTACTCTCAGTTTACCGTCACATAGTTGCTACTCTCATCATGGCTCCCTTTGCTCTTGTCCTAGAAAGAAAAGTAAGGCCAAAGATGACACTCCCAATCTTCCTGAGATTAGCAGTGCTTGGTTTCCTTGAGCCAGTGCTTGATCAGAATCTGTACAACATGGGGATGAAGTACACCTCAACGACGTTTGCATCCGCCACCGTTAATGTCCTTCCAGCAATTACCTTTATAATGGCACTCGTTTTCAGATTAGAAACAGTGAACTTGAAAAAAATACACAGCCTAGCCAAGATAATTGGAACCGCAGTTACAGTATCAGGAGCCATGGTTATGACTTTATACAAAGGCCCTGAGCTTCAGATCATAAAGGGACAAGGTGGTAGCCAACATCATAGTGCCAGCACCGATGCCTCTAACCAACACTGGGTTCTTGGCACACTAATGCTCATTGCAAGTTGCTGTGGTTGGGCTAGCTTCTTTATATTGCAATCTTTCACTTTGAAGTTGTACCCAGCAGAACTCTCGGTGACATCTTGGATTTGCTTTTTGGGTATTTTTGAGGGTGCAATTGCGTCTCTTATCTTCGAACGTGACATGAGTGTGTGGTCCATAGGATGGGACTCAAGGCTTTTGGCTTGTGTTTATTCTGGAGTGGTGTGTTCTGGAATGGCATACTATATACAAGGAGTAGTAACCAGGGAACGTGGACCTGTGTTTGTAACTTCATTCAGCCCATTATGTATGATTATCACGGCAGCATTGGGTTCCATTATCTTAGCTGAGCAAATTCATCTAGGAAGCATAATTGGAGCTATTATAATTGTGACCGGACTTTACACTGTGGTATGGGGAAAAAGCAAGGACAGTGTGAACACAAAGGATGCAGGGAGAGACAAAGAACTGTCAATAAAGGATGGAACAATATCAGGATCAAACATTTTGGACAGCATAGAGGTCAATGTTCCTGATCAGATGAGGGGAGAAGGGAAGAGTGTCCTACATGGTACAAGATCTTAG 1164 0.4304 MENEDQNGEGRLSMIRKMKPYLAMVSLQFGYAGMYIITMVSFKHGLSHWVLSVYRHIVATLIMAPFALVLERKVRPKMTLPIFLRLAVLGFLEPVLDQNLYNMGMKYTSTTFASATVNVLPAITFIMALVFRLETVNLKKIHSLAKIIGTAVTVSGAMVMTLYKGPELQIIKGQGGSQHHSASTDASNQHWVLGTLMLIASCCGWASFFILQSFTLKLYPAELSVTSWICFLGIFEGAIASLIFERDMSVWSIGWDSRLLACVYSGVVCSGMAYYIQGVVTRERGPVFVTSFSPLCMIITAALGSIILAEQIHLGSIIGAIIIVTGLYTVVWGKSKDSVNTKDAGRDKELSIKDGTISGSNILDSIEVNVPDQMRGEGKSVLHGTRS* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0897 387 PANTHER WAT1-RELATED PROTEIN 14 350 IPR030184 GO:0016021|GO:0022857
Lan2g0897 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 54 164 - -
Lan2g0897 387 PANTHER WAT1-RELATED PROTEIN 14 350 - -
Lan2g0897 387 Pfam EamA-like transporter family 32 153 IPR000620 GO:0016020|GO:0016021
Lan2g0897 387 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020|GO:0016021
Lan2g0897 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0897 Lan-Chr2 19485937 19491919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0897 17 375 Nodulin-like Gene Family AT4G08300 61.918 2.57e-165 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0897 - - gmx:100814921 600.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g0897 2 19485937 19491919 Lan11g0511 11 3953680 3956934 LSH
Lan2g0897 2 19485937 19491919 Lan9g1084 9 18037372 18041682 LSH