Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0891 ATGCGACTCTTGATGAACCCACCGCGGCAAGGATCTGTAGTGATACGAAGGGTTTGGAGATCAAACGTTGAAGCAGAATTCCATTTGATACGCAATATCATAACCTCGTACCCTGTCATTGCAATGGATACAGAATTTCCTGGGTTAGTGATTCGCTCCGAGTCCAATTTCCGGCACCGGAAACCATCGGAAAACTACGCTCTTTTGAAAGCCAATGTTGATCGCCTCCACCTCATTCAAGTTGGACTCACACTATCCGACAAACATGGCAATCTTCCAAACCTCGGAACCCCTTACTCCTTCATATGGGAGTTTAACTTCTGCGATTTTGATGTCTCGCGTGATCTCCACGCACCTGAATCGATCGCACTTCTCCGCCGCCAAGGCATCGATTTCGAGATGAACAGAAAGTTTGGCATTCATTTGATGCATTTCAGACAGTTGTTGTTGAGGTCCAGAATTCTTGGAAGACGCAACCAAGTTTCCTGGGTCACTTTCCACAGCGCGTATGACTTCGGCTTCCTTGTCAAGATTCTCACGCGCCGCCCGTTGCCGGAGGAGCTTGCTGGTTTTCTGCATACGGTGAGGATATTTTTTGGAGAGATGGTTTTTGATGTGAAGCACGTCATGAAGTTCTGCTCGAATCTTTATGGTGGTTTGGATCGGATTTGCCAAACCTTGAGAGTGGACCGGGTAGCTGGGAATAGCCACCAGGCCGGGTCAGATAGTCTGCTTACTCTCCACGCTTTTCACAAGATCAAACAACTCTATTTTGGTACCAAAAATAGTGATGAACTCATCAATTTTGCTGGTGTCTTGTATGATTTAGAAGAAAATTATTGA 843 0.4614 MRLLMNPPRQGSVVIRRVWRSNVEAEFHLIRNIITSYPVIAMDTEFPGLVIRSESNFRHRKPSENYALLKANVDRLHLIQVGLTLSDKHGNLPNLGTPYSFIWEFNFCDFDVSRDLHAPESIALLRRQGIDFEMNRKFGIHLMHFRQLLLRSRILGRRNQVSWVTFHSAYDFGFLVKILTRRPLPEELAGFLHTVRIFFGEMVFDVKHVMKFCSNLYGGLDRICQTLRVDRVAGNSHQAGSDSLLTLHAFHKIKQLYFGTKNSDELINFAGVLYDLEENY* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0891 280 Gene3D - 4 280 IPR036397 GO:0003676
Lan2g0891 280 SUPERFAMILY Ribonuclease H-like 7 277 IPR012337 -
Lan2g0891 280 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 7 278 IPR039637 GO:0004535|GO:0030014
Lan2g0891 280 Pfam CAF1 family ribonuclease 18 142 IPR006941 -
Lan2g0891 280 PANTHER CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATED 7 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0891 Lan-Chr2 19428264 19429106 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0891 K12581 - gmx:100805583 359.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0626 11 5135417 5137683 Lan2g0891 2 19428264 19429106 LSH
Lan9g0999 9 16848823 16851097 Lan2g0891 2 19428264 19429106 LSH