Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0886 ATGGCCGATGATTTATTTGAGATTGATTTGTTCGTTTATACCAGATTGTCTAGTACAAATATTAATGAAGATATTGGTGTTGTTCCACTAAACTATTTTAGCTTAGATTTCCATGATGAAGACATTGATGATGATCTAGCTAACTTTATTAGCATAGATATTAATCAAAATATTGATCAACAACATGCATGTAACACATTGGCATCGATTCAGAATTCATTGGAGAGACTGAAATATGAAGAAGATGCTTCTCTTTCGAAGGAACAATGTGCCATTTGTTTGGAGGAGTTCTGCAATGGAGATGAGTCAAAGTTGCTGGTTCGTACACAGTGTTTGCATGTATTTCATGAAGATTGTATGATCAAGTGGCTCCAACGTTGTAGTAATGTCAACCAATCCTATTCTTGTCCAATGTGTCGTTGCCAAATTTCATCCAAGAATTAA 444 0.3468 MADDLFEIDLFVYTRLSSTNINEDIGVVPLNYFSLDFHDEDIDDDLANFISIDINQNIDQQHACNTLASIQNSLERLKYEEDASLSKEQCAICLEEFCNGDESKLLVRTQCLHVFHEDCMIKWLQRCSNVNQSYSCPMCRCQISSKN* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0886 147 SMART ring_2 90 139 IPR001841 -
Lan2g0886 147 SUPERFAMILY RING/U-box 72 145 - -
Lan2g0886 147 ProSiteProfiles Zinc finger RING-type profile. 90 140 IPR001841 -
Lan2g0886 147 Pfam Ring finger domain 89 140 IPR001841 -
Lan2g0886 147 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 65 140 - -
Lan2g0886 147 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 52 146 IPR013083 -
Lan2g0886 147 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 65 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0886 Lan-Chr2 19371392 19371835 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0886 74 143 C3H Transcription Factor Family AT4G12190 38.889 2.97e-12 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0886 - K22378 lang:109327943 293.893