Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0885 ATGGAGCTTGTGGAAACACCAAAGTTACAACAACAGAAGAAGCAACAACATTTTCATGTGTTGGTGGTAGATGATAGTGTTATTGACAGGAAGCTTCTAGAGAGGCTTCTGAGAGATTCTTCATGCAAAGTTACCTTCATGGAATCTGGAGACAAGGCTTTGAAATATCTTGGACTGCTTGATGACATTGATAATGATTCTTCAACTTCTTCACAGCCATTGCCATTGCAAGATGGATCCTCTTGGAAAGATGTACCAGTAGTGATTATGTCATCAGAAAATGTACCTTCCAGAATCAGCAGGTGCTTGGAAGGAGGGGCAAAGGAGTTTCTATTGAAGCCTCTTCAGTTTTCAGATTTGGAGAAGCTTCAGCCATATTTTATGACATCCTTTGATAATTGTAGTCATCAAAAATATGCTAACAGTTCCAAAGCTTCTAACAATGGCAACAATAACAACAATATAAAAAACAATGACATGACCAAATTGAAGGGGATGCATGGTGAACATAGTTTTAAATTATGGTATGTTACAGCTGCAATATTACAGTTTTGGAAGTCTATATAA 567 0.3721 MELVETPKLQQQKKQQHFHVLVVDDSVIDRKLLERLLRDSSCKVTFMESGDKALKYLGLLDDIDNDSSTSSQPLPLQDGSSWKDVPVVIMSSENVPSRISRCLEGGAKEFLLKPLQFSDLEKLQPYFMTSFDNCSHQKYANSSKASNNGNNNNNIKNNDMTKLKGMHGEHSFKLWYVTAAILQFWKSI* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0885 188 Gene3D - 74 151 - -
Lan2g0885 188 SUPERFAMILY CheY-like 18 122 IPR011006 -
Lan2g0885 188 MobiDBLite consensus disorder prediction 141 160 - -
Lan2g0885 188 ProSiteProfiles Response regulatory domain profile. 19 128 IPR001789 GO:0000160
Lan2g0885 188 Gene3D - 3 73 - -
Lan2g0885 188 PANTHER TWO-COMPONENT RESPONSE REGULATOR ORR4 80 158 - -
Lan2g0885 188 PANTHER TWO-COMPONENT RESPONSE REGULATOR ORR4 8 63 - -
Lan2g0885 188 PANTHER TWO-COMPONENT RESPONSE REGULATOR 80 158 IPR045279 GO:0009736
Lan2g0885 188 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 63 IPR045279 GO:0009736
Lan2g0885 188 MobiDBLite consensus disorder prediction 141 162 - -
Lan2g0885 188 SMART REC_2 18 124 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0885 Lan-Chr2 19350834 19354056 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0885 15 147 Response Regulator Gene Family AT3G57040 42.593 4.94e-39 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan2g0885 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0885 K14492 - gmx:100790440 210.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g0885 2 19350834 19354056 Lan9g1073 9 17954933 17958202 LSH