Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0878 ATGTCTAGCAAGGTTGGTAAGGTCATCAAGTGCAGAGCTGCGGTGGCGTGGGAGGCAGGGAAGCCACTAGTGATAGAAGAAGTCGAGGTTGCGCCGCCACAGCGCGGTGAAGTCCGTTTGAAGATCCTCTACAATTCTCTTTGCCGTACAGATGTTTACTGGTGGGAGGCCAAGGGCCAGAATCCATTATTTCCCCGCATACTAGGTCATGAAGCTGCAGGGATTGTGGAGAGCATAGGTGAGGGTGTGACTGATCTCAAACCCGGGGACCATGCCCTCCCTGTGTTCACTGGAGAGTGCGGAGAATGTGCACATTGCAAGTCAGATGAGAGCAACTTGTGCGAGCTACTCAGAATCAACACAGATAGAGGTGTTATGCTCAATGATGGAAAAACTAGATTTTCGAAAAATGGACAGCCCATTTACCATTTCGTCGGAACCTCTACATTCAGCGAATACACTGTTGTTCATGCTGGATGTGTTGCAAAGATCAACCCTGCTGCTCCACTTGACAAAGTTTGTGTTCTCAGCTGCGGATTCTGCACAGGTTTTGGTGCTACTGTAAATGTTGCAAAACCAAAGCCCGATTCTTCTTTTGCTGTCTTTGGACTTGGAGCTGTTGGTCTTGCTGCTGCTGAAGGGGCAAGGCTTTCAGGTGTATCTAGAATCATCGGGGTTGATTTAGTTCCGAACCGATTTGAGGAAGCCAAAAAGTTTGGTGTCACTGACTTTGTGAATCCTAAAGATCATAACAAACCTGTACAACAGATCATTGCTGAGATGACTAATGGAGGAGTAGATCGCGCTGTTGAATGTACTGGAAACATCCAAGCTTCCATTGCTGCATTTGAATGTGTTCATGATGGATGGGGTGTTGCTGTTCTTGTTGGTGTGCCGAAAAAAGATGCCGAATTTAAAACTCATCCTATGAATTTCTTGGATGGGAGAACTCTTAAGGGTACCTTCTTTGGTAACTACAAACCCCGCACGGATCTTCCTTCTGTTGTGGAGAAGTGCATGAACAAGGAGCTGGAAGTGGAGAAATTTATCACTCACTCAATTCCATTCTCAGAGATTAATAAAGCATTTGAGTACATGCTAAAAGGGGAGGGTATAAGGTGCCTTATCCGCATGGAAGAGTAA 1143 0.4611 MSSKVGKVIKCRAAVAWEAGKPLVIEEVEVAPPQRGEVRLKILYNSLCRTDVYWWEAKGQNPLFPRILGHEAAGIVESIGEGVTDLKPGDHALPVFTGECGECAHCKSDESNLCELLRINTDRGVMLNDGKTRFSKNGQPIYHFVGTSTFSEYTVVHAGCVAKINPAAPLDKVCVLSCGFCTGFGATVNVAKPKPDSSFAVFGLGAVGLAAAEGARLSGVSRIIGVDLVPNRFEEAKKFGVTDFVNPKDHNKPVQQIIAEMTNGGVDRAVECTGNIQASIAAFECVHDGWGVAVLVGVPKKDAEFKTHPMNFLDGRTLKGTFFGNYKPRTDLPSVVEKCMNKELEVEKFITHSIPFSEINKAFEYMLKGEGIRCLIRMEE* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0878 380 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
Lan2g0878 380 Gene3D - 183 321 - -
Lan2g0878 380 PANTHER ALCOHOL DEHYDROGENASE 4 378 - -
Lan2g0878 380 CDD alcohol_DH_plants 9 377 - -
Lan2g0878 380 Pfam Zinc-binding dehydrogenase 206 331 IPR013149 -
Lan2g0878 380 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 341 IPR036291 -
Lan2g0878 380 SUPERFAMILY GroES-like 329 377 IPR011032 -
Lan2g0878 380 Pfam Alcohol dehydrogenase GroES-like domain 36 163 IPR013154 -
Lan2g0878 380 Gene3D - 19 370 - -
Lan2g0878 380 PANTHER ALCOHOL DEHYDROGENASE-RELATED 4 378 - -
Lan2g0878 380 SUPERFAMILY GroES-like 5 187 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0878 Lan-Chr2 19213796 19217481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0878 37 370 Monolignol Biosynthesis Gene Families AT1G72680 25.364 1.45e-15 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0878 K18857 - gmx:100775490 664.455