Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0874 ATGACTATGATGAACAACAACAACTTTGGACAATTTGGGGATACAACTCTGACCAAGGTTTTTGTTGGGGGTCTAGCATGGGAGACTCCGAAAGAAGCATTGAGGGAACATTTTGACAAGTATGGTGAGATCCTTGAAGCTGTTATCATTTCTGATAAGCTAACTGGTAGATCCAAAGGCTATGGATTTGTGACGTTCAAGGAGGCTGAGGCTGCCAAGAAGGCTTGTGAGGATCAAGCAACTTTGGTTATCAATGGCCGCCTAGCAAATTACAATCTGGCTTCTCTAGGAGCGCGCCGCCCGAGGTTTTCTTCCAATGCTTCACCACCACATCCACAACCACAAGAAGGATCCAACGGTGGAGGACCAAGGAATAACACATCAAGCACACCTCCTCCCAATCACGTGCAGTGGTATTATCCAGTGGGGACACCTGCTTCCCCATTCCATCATCAAGCCCTCCCTTACTATGGGTACACACCCACCTACATTGCACCAAACGTAAATTACAATTACAACCAGAAGCTGGGCTACGGAAGCGGTGGAGCGTACATGAATGCACACCACGTGTCCCATGTGTACCCAAGACAGGCTATCATTGGTGGCAACACATTGATGCCAATGTACCCTGTGTATCATCATCCAACGGAGACGATGGGAGTACCTGCTCATTACTTTCATCCAACGGTGGCTACCCATTTTGCATCAGTGCCAGCACGTATAATGTCCAAGCCCGTATCTATCACTCCTCACACAGGTCAGTTGGTACAGTTGAGTGCTTCAAAAGGGTCATCTGAGAGGAGCAACATTATAATCTCATCTGTTGTGGCTCTACTTTCCATTTCTTTTCATTTTTTTTAA 861 0.4669 MTMMNNNNFGQFGDTTLTKVFVGGLAWETPKEALREHFDKYGEILEAVIISDKLTGRSKGYGFVTFKEAEAAKKACEDQATLVINGRLANYNLASLGARRPRFSSNASPPHPQPQEGSNGGGPRNNTSSTPPPNHVQWYYPVGTPASPFHHQALPYYGYTPTYIAPNVNYNYNQKLGYGSGGAYMNAHHVSHVYPRQAIIGGNTLMPMYPVYHHPTETMGVPAHYFHPTVATHFASVPARIMSKPVSITPHTGQLVQLSASKGSSERSNIIISSVVALLSISFHFF* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0874 286 CDD RRM_RBM24_RBM38_like 18 94 - -
Lan2g0874 286 PANTHER GEO13361P1-RELATED 1 255 - -
Lan2g0874 286 MobiDBLite consensus disorder prediction 100 137 - -
Lan2g0874 286 Gene3D - 5 109 IPR012677 -
Lan2g0874 286 SMART rrm1_1 19 92 IPR000504 GO:0003723
Lan2g0874 286 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 18 96 IPR000504 GO:0003723
Lan2g0874 286 SUPERFAMILY RNA-binding domain, RBD 17 106 IPR035979 GO:0003676
Lan2g0874 286 MobiDBLite consensus disorder prediction 109 135 - -
Lan2g0874 286 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 20 86 IPR000504 GO:0003723
Lan2g0874 286 PANTHER RNA-BINDING PROTEIN ARP1-RELATED 1 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0874 Lan-Chr2 19157830 19161605 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0874 14 95 C2H2 Transcription Factor Family AT2G19380 42.683 1.14e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0874 - - lang:109337745 565.844