Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0868 ATGGATTCAATCAAGTCCTTCAAGGGCTACGGTAAAGTTGATGAGCTCGAGCAGCAAGCCTATCAGAATAAGACGCGTAAGCGTGTTATAATCCTTATAGTCTCATCTGTGATTCTAGTAGCGGTGATTGTAGCTGCTGTCACAGGAATCGTGATACACAAGCGCAACACCTCATCATCTTCTTCATCTAACTCGGTTCCACAAACCGAGTTAGCCCCTGCCGCGTCACTCAAAGCAGTTTGCGATGTGACTCAGTATCCTAACTCGTGCTTTGCCGCCATTTCCTCACTCCCGAATTCGAACACCACCGATCCTAAGCTTCTCTTCAAGCTCTCTCTCCGTGTCGCCATTGATGAACTCTCAAAGCTTTCGAGCTTTACTCCGAAGCTTCGCGACAATGCAAACAACGATCCACGGCTCCAGAAAGCGATTGATGTGTGCGGAACGGTTTTCGAAGACGCGTTGGATCAGCTCAATGATTCGATCTCGTCGATTGGAAATTCCGGCGCCGGGAAAGTGTTACCATCGTCGGATATCAGCGACGTGAAAACCTGGCTCAGCGCTGTAATGACAAACCAGGAAACATGCATCGATGCCGTCGGAGAACTTAACTCGACCGCCGCGCGAGGTGTTCTCCGGGAACTGGAAACCGTCACGAGAAACTCCACTGAGTTCGTTAGCAATAGCTTAGCCATTGTTACCAGAATCCTCGGGCTTCTCTCGAAGTTCGACGCTCCGATCCACCACCGGAAGTTGCTAGGGTTTGGAGGTTCCGATTCGGAGTTTCCGGCATGGGTAGGGGCGACGGAGCGGAGGCTGCTGCAGGCAAACGTGACGGCGCCGGATGCTGTGGTAGCAAAGGATGGGAGCGGGCAATTCACGACGATAGGGGAAGCATTGAAGATGGTGAAGAAGAAGAGTTTAACGAGGTTCGTGGTGTATGTGAAGGCAGGGACTTATATTGAAAACATTGATTTGGATAAGAATGCATGGAATGTGATGATTACCGGTGACGGCAAGGATAAGACCATCGTCTCCGGCAGCCGCAACTTCAAGGACGGCACCCCCACTTTTGAGACCGCCACTTTTGCTGCTAAGGGTAAGGGATTCATTGCCAAAGACATAGGGTTCCATAACACTGCAGGTGCAGAAAAGCACCAGGCCGTGGCCCTTCGATCTGGTTCGGACGAATCTGTGTTCTACAGGTGCTCATTTGTAGGCTTCCAGGATACTCTCTATGCTCATTCAAACCGCCAATTCTACCGCGAATGTGACATTACAGGCACCATTGATTTCATATTTGGCAACGCAGCTGTTGTGTTCCAAAATTGCAAAATCATGCCTAGGCAGCCCATGTCAAACCAGTTCAACACCATCACAGCTCAGGGCAAGAAAGACCCCAACCAGAACACTGGAATTGTGATACAAAAATCAGTAATCACTACCCTTGATAATGATATTCTCACAGCTGCTACATACCTTGGTAGGCCTTGGAAAGATTTCTCTACTACAATTATCATGCAAACTGATATTGGGTCTTTCTTGAAACCTGTGGGGTGGATTAGTTGGGTCCCTAATGTGGATCCTGTAAGTACCATTTTTTATGCTGAATACCAGAATACGGGGCCAGGAGCAGGTGTGTCCCAAAGGATTACATGGGCTGGTTATAAGCCTAGTCTCACAGATGATGAAGCAGTGAAGTTCACAGTACAAACCTTTATCCAAGGCCCAGAGTGGTTACCAAACTCTGCTGTGGAGTTTGAGTCTGCCTTGTGA 1776 0.4882 MDSIKSFKGYGKVDELEQQAYQNKTRKRVIILIVSSVILVAVIVAAVTGIVIHKRNTSSSSSSNSVPQTELAPAASLKAVCDVTQYPNSCFAAISSLPNSNTTDPKLLFKLSLRVAIDELSKLSSFTPKLRDNANNDPRLQKAIDVCGTVFEDALDQLNDSISSIGNSGAGKVLPSSDISDVKTWLSAVMTNQETCIDAVGELNSTAARGVLRELETVTRNSTEFVSNSLAIVTRILGLLSKFDAPIHHRKLLGFGGSDSEFPAWVGATERRLLQANVTAPDAVVAKDGSGQFTTIGEALKMVKKKSLTRFVVYVKAGTYIENIDLDKNAWNVMITGDGKDKTIVSGSRNFKDGTPTFETATFAAKGKGFIAKDIGFHNTAGAEKHQAVALRSGSDESVFYRCSFVGFQDTLYAHSNRQFYRECDITGTIDFIFGNAAVVFQNCKIMPRQPMSNQFNTITAQGKKDPNQNTGIVIQKSVITTLDNDILTAATYLGRPWKDFSTTIIMQTDIGSFLKPVGWISWVPNVDPVSTIFYAEYQNTGPGAGVSQRITWAGYKPSLTDDEAVKFTVQTFIQGPEWLPNSAVEFESAL* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0868 591 SMART PMEI_2 72 232 IPR006501 GO:0004857
Lan2g0868 591 TIGRFAM PME_inhib: pectinesterase inhibitor domain 60 234 IPR006501 GO:0004857
Lan2g0868 591 PANTHER PECTINESTERASE 1-RELATED 8 588 - -
Lan2g0868 591 SUPERFAMILY Pectin lyase-like 278 587 IPR011050 -
Lan2g0868 591 Pfam Pectinesterase 282 576 IPR000070 GO:0030599|GO:0042545
Lan2g0868 591 Gene3D Invertase/pectin methylesterase inhibitor family protein 75 237 IPR035513 -
Lan2g0868 591 PANTHER PECTINESTERASE 8 588 - -
Lan2g0868 591 Gene3D - 276 591 IPR012334 -
Lan2g0868 591 CDD PMEI-like_3 79 236 - -
Lan2g0868 591 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 77 237 IPR035513 -
Lan2g0868 591 ProSitePatterns Pectinesterase signature 2. 426 435 IPR033131 -
Lan2g0868 591 Pfam Plant invertase/pectin methylesterase inhibitor 77 232 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0868 Lan-Chr2 19033444 19036481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0868 1 585 Carbohydrate Esterase AT1G53840 58.037 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0868 - - lang:109360530 1030.39