Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0860 ATGGGAAACAGTGAGGAAGGGAAATCCGTTCAGACTGAAAAGCCTTCTCCGCCGGATCATGCTAATCAGGCCAACCAGCCTAATGTTCATGTCTATCCTGATTGGGCTGCCATGCAGGCATACTATGGACCAAAATTCAGCATTCCACCATACTACCACCCATCTATGGCTTCTGGTCATGCTCCTCCCCCATACATGTGGGGTCCACCACAGCCTATGATGACACCATATGGGCCACCTTATGCAGCAATTTATCCACATGGAGGGGTTTATACTCACTCTGCAGTTGCTATTGGGCCTCATTCACATGGCCAAGGAGTTCCATCTTCAAATGCTGCTGGAACTCCTTCAAGCGTGGAGACACCAACCAAAATTTCCGGAAATACTGATAAGGTTTTAATCAAGAATGGGTTTGAAGGGCTTGCAATGTCAATAGGAAATGATAATGCTGAGAGTGAAGAGTGTGGAGTTGAAAACAGGCTGTCACAGAGTGTGGATACTGAGGGTTCGAGTGATGGAAGTGATGGCAACACTTCAGGGGTCAGTAATCAATCACGGAAAAGAAGCTGTCAGGGAACACCAACTACTGATGGGGAAGAGAAAACTGAGATACAAAATAATCCAGTTCCCAAAGAAACAGCTGCTTCCAATAAGATAATGTCAGTTAAGCCAATCAGTGTTGCAGGAAAATTTGTTGGATCTACAGTTTCTTCAGGTATGACCACAGCACTGGAGCTGAGGAACCTTTCAACTATTAATTCTAAGGCAAATCCCACAAGTGGCCTACAACCTTGTGGAGTTTTGCCTCCTGAAGTTTGGATACAGAATGACTGTGACCTGAAATGTGAGAAGAGGAAACAATCAAACCGTGAATCTGCTAGACGGTCCAGGTTAAGGAAGCAGGCCGAGGCTGAAGAATTAGCAAGAAAAGTTGATAACTTGAATGCTGAGAATGCATCACTGACATCAGAACTAAATCAACTTGCTGAAAGTTCTGAGAAATTGAGGGCGGAAAATGCTACATTGAGGGAAAAACTAAAAAGTGCGCAACTGGTAGAAGCAGAAGAGGTCATTTTGAACAGCATTGACATCCAGAGGGCTACACCTATAAGTACAGAAAACTTACTATCAAGAGTTAATAATTCGGGTTCCGATGATAGAACTGCAGAGGATGAGAATGATTTTGGTGAGAACAAACCAACATCCGGGGCAAAGCTGCATCAACTACTGGATAATCGGAGAGCTAATGTCGTGGCAGCTAGTTGA 1266 0.4431 MGNSEEGKSVQTEKPSPPDHANQANQPNVHVYPDWAAMQAYYGPKFSIPPYYHPSMASGHAPPPYMWGPPQPMMTPYGPPYAAIYPHGGVYTHSAVAIGPHSHGQGVPSSNAAGTPSSVETPTKISGNTDKVLIKNGFEGLAMSIGNDNAESEECGVENRLSQSVDTEGSSDGSDGNTSGVSNQSRKRSCQGTPTTDGEEKTEIQNNPVPKETAASNKIMSVKPISVAGKFVGSTVSSGMTTALELRNLSTINSKANPTSGLQPCGVLPPEVWIQNDCDLKCEKRKQSNRESARRSRLRKQAEAEELARKVDNLNAENASLTSELNQLAESSEKLRAENATLREKLKSAQLVEAEEVILNSIDIQRATPISTENLLSRVNNSGSDDRTAEDENDFGENKPTSGAKLHQLLDNRRANVVAAS* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0860 421 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 284 299 IPR004827 GO:0003700|GO:0006355
Lan2g0860 421 Pfam G-box binding protein MFMR 1 96 IPR012900 -
Lan2g0860 421 Gene3D - 281 334 - -
Lan2g0860 421 MobiDBLite consensus disorder prediction 104 125 - -
Lan2g0860 421 MobiDBLite consensus disorder prediction 101 125 - -
Lan2g0860 421 MobiDBLite consensus disorder prediction 156 214 - -
Lan2g0860 421 CDD bZIP_plant_GBF1 283 330 IPR045314 GO:0003700|GO:0006355
Lan2g0860 421 Coils Coil 290 352 - -
Lan2g0860 421 MobiDBLite consensus disorder prediction 1 28 - -
Lan2g0860 421 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 421 IPR044827 GO:0003700|GO:0006355|GO:0043565
Lan2g0860 421 SMART brlzneu 277 341 IPR004827 GO:0003700|GO:0006355
Lan2g0860 421 MobiDBLite consensus disorder prediction 150 215 - -
Lan2g0860 421 SUPERFAMILY Leucine zipper domain 281 336 IPR046347 GO:0003700|GO:0006355
Lan2g0860 421 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 279 342 IPR004827 GO:0003700|GO:0006355
Lan2g0860 421 PANTHER G-BOX-BINDING FACTOR 3 1 421 - -
Lan2g0860 421 MobiDBLite consensus disorder prediction 376 410 - -
Lan2g0860 421 Pfam Disordered region downstream of MFMR 135 258 - -
Lan2g0860 421 MobiDBLite consensus disorder prediction 384 398 - -
Lan2g0860 421 Pfam bZIP transcription factor 280 339 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0860 Lan-Chr2 18891173 18897258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0860 1 420 bZIP Transcription Factor Family AT2G46270 44.419 2.71e-99 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan2g0860 MFMR_assoc 1e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0860 K09060 - gmx:778133 592.038