Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0848 ATGAGACCACCCCATTTCGTAACTAATCCAAATCATCATTTACTTCCAATTTTCGCCACCACCACCGTGTGTATGGATGCTACGTTCCACCACCGCCATCGCCGGAAAGACAAGGTGGTTGTCATCATGGGCGCAACCGGCGCAGGAAAATCGCGCCTTTCAATCGACCTTGTTACCCACTTCTTCCCCTTCTCCGAAATCATCAACTCCGACAAAATTCAACTCTACAAGGGACTCAACATCACCACCAACCAGATCCCCATTGAAGAACGCAACGGCGTCCCCCACCATCTCCTAGGGGAGTTCGACCCCGCAAACGGCGAATTCACCTCATCGGAGTATCGCCGCCGTGCCGGAGAACTCATAACCGACATCACCTCCCGGAGGAAGCTCCCAATCCTCGTCGGAGGGTCCAACTCGCTCATTCACGCACTTCTCGTTGAAAGATTCGACCCCGAGTTAAGTGTGTTTGATAAATTTGATGAGTTGTCACCAACGATTCAAAACGAGTTGACTCGGTTGAGATACGAGTGTTGTTTTCTATGGGTGGATGTTTCATTCCAGGTTTTATCTGATTACTTATTAAAACGAGTTGATGAAATGCTTGACTCGGGAATGGTGGACGAGTTGGCCGAGTTTTTTGACCCGGAATCGGACGATTTAGATTATGACTCGGCACATAGGAGTGGGTTGAGGAAAGCAATTGGTGTACCGGAGTTTGACCGTTATTTTAAGGAATACCCGCCGCTGTTAGGGAAACGAGGTTGTTATAGGGTGGGAGAGGATCGTGTGCAGAAGGGTGCATATGATTTTGCTGTGAGGGCGATTAAAGACAACACGTGTCAGCTTGCTAAACGACAGATTGAGAAGATCGTGCGGTTAAAAAGGGCGGGGTGGGATTTAGGGAGAATAGATGCCACGGCGGCGTTTAGGGCAATGCTAGACGGTGGAGGGAGGTGGTCGGAGATTTGGGAAAGGGAGGTGTTGGAACCGAGCGTGAAGATTGTGAAGAGGTTGTTTTAG 1023 0.4956 MRPPHFVTNPNHHLLPIFATTTVCMDATFHHRHRRKDKVVVIMGATGAGKSRLSIDLVTHFFPFSEIINSDKIQLYKGLNITTNQIPIEERNGVPHHLLGEFDPANGEFTSSEYRRRAGELITDITSRRKLPILVGGSNSLIHALLVERFDPELSVFDKFDELSPTIQNELTRLRYECCFLWVDVSFQVLSDYLLKRVDEMLDSGMVDELAEFFDPESDDLDYDSAHRSGLRKAIGVPEFDRYFKEYPPLLGKRGCYRVGEDRVQKGAYDFAVRAIKDNTCQLAKRQIEKIVRLKRAGWDLGRIDATAAFRAMLDGGGRWSEIWEREVLEPSVKIVKRLF* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0848 340 Gene3D - 36 338 IPR027417 -
Lan2g0848 340 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 29 338 IPR039657 -
Lan2g0848 340 Pfam IPP transferase 74 150 - -
Lan2g0848 340 Pfam IPP transferase 168 288 - -
Lan2g0848 340 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 187 301 - -
Lan2g0848 340 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 186 IPR027417 -
Lan2g0848 340 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 4-RELATED 29 338 - -
Lan2g0848 340 Hamap tRNA dimethylallyltransferase [miaA]. 39 315 IPR018022 GO:0008033
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0848 Lan-Chr2 18719591 18721270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0848 175 337 C2H2 Transcription Factor Family AT2G27760 26.519 1.16e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0848 K10760 - mnt:21398523 376.326