Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0838 ATGCAAAGCTTCAAAACAGCTCAAACAAATTCTCAACTCTATTGCCATTCGCCTTTCTTGCTTAGGGGAGATGAAACTAACAGAAACCCACCACGTTTCTCTGATCTTGGAGAACTTCAACATTCTGCTGCTGTGTTTCAACATGAAGATGCTGTTGATTTAAGTTCAAGCTCTATGTTTAGTGTAAAATCTAGCAATGTAGCAATTGGTGGCAGTAACATGCAATATGGAACATTGCACACGAACCTTGGGCCTACTGAGATTGCATCAAGTGGAGGAGGGTGCATGGACATGTACCAGAATGGAATTGCTATGGCCACTTTGCCTATAGGAAATGGTCATGTTGAGAATTGGGGTGATTCTGGCATAGCAGATAATAGCCAACACACTGATGATACTTCCACTGATATTGACACTGATGATAAAAACCAATGTAATAGAGCTCAGCACGGTCCACTTATAGTAGTGGACTCCAAAGATGAGACAAAGCCCAAACCTGACGATCACAAGACACTTCGTAGGTTGGCTCAGAATCGGGAGGCTGCAAGGAAGAGTCGATTAAGGAAAAAGGCATATGTACAGCAGTTGGAGACCAGCCGAGTCAAGCTTGCACAATTAGAGCAAGAGCTTCAGCGAGCACGTCAACAGGGTATATTTATCGCAAATCCTGGGGATCATTGTCATTCGGCTGTTGGAAATGGCGCCTTAGCATTTGACTTGGAGTATGCCCGCTGGGTTGATGAGCATCAACGATTTCTCAATGACCTAAGATCTGCTATAAATTCTCAAATCGGAGACAGTGATTTACATCTTCTCGTTGATGGTGTCATGGCACATTATGATGAATTATTTAGGTTAAAGAGCGTAGGTGTGAAGGCTGATGTATTCCACATGCTTAGTGGGATGTGGAAGACACCTGCAGAAAGATGGTTTATGTGGCTTGGTGGATTTCGTTCCTCTGAACTTCTGAAGATAGTTAAGAACCACCTTGAGCCGTTGACAGAACAGCAATTGGCGGGCATTGATAATCTGCAGCACTCTTCACAACAGACTGAGGATGCTTTATCTCAAGGCATGGAAGCATTGCAACAATCTCTTATAGAGACCCTTACATGCACCTCACTAGGATCCACTGGTTCAGGAAATGTTGCGGATTACATGGGTCAAATGGCAATCGCAATGGGCAAGCTTGCCGCACTAGAGAATTTCCTTCGTCAGGCTGACCTCTTGAAGCAAGGAACTCTGCAACAGCTACAACGAATCCTGACTACACGTCAAGCTGCTCGTGCTCTCATTGTTATAAATGATTACGTTTCAAGACTAAGAGCGCTTAGTTCATTATGGTTAGCGCGCCCTAGAGAGAACTCAGTGATGAGTTGCTGTGACCCTCAAATATAG 1398 0.4413 MQSFKTAQTNSQLYCHSPFLLRGDETNRNPPRFSDLGELQHSAAVFQHEDAVDLSSSSMFSVKSSNVAIGGSNMQYGTLHTNLGPTEIASSGGGCMDMYQNGIAMATLPIGNGHVENWGDSGIADNSQHTDDTSTDIDTDDKNQCNRAQHGPLIVVDSKDETKPKPDDHKTLRRLAQNREAARKSRLRKKAYVQQLETSRVKLAQLEQELQRARQQGIFIANPGDHCHSAVGNGALAFDLEYARWVDEHQRFLNDLRSAINSQIGDSDLHLLVDGVMAHYDELFRLKSVGVKADVFHMLSGMWKTPAERWFMWLGGFRSSELLKIVKNHLEPLTEQQLAGIDNLQHSSQQTEDALSQGMEALQQSLIETLTCTSLGSTGSGNVADYMGQMAIAMGKLAALENFLRQADLLKQGTLQQLQRILTTRQAARALIVINDYVSRLRALSSLWLARPRENSVMSCCDPQI* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0838 465 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 38 454 - -
Lan2g0838 465 Coils Coil 189 216 - -
Lan2g0838 465 PANTHER TRANSCRIPTION FACTOR TGA9 38 454 - -
Lan2g0838 465 Gene3D - 169 218 - -
Lan2g0838 465 SUPERFAMILY Leucine zipper domain 170 212 IPR046347 GO:0003700|GO:0006355
Lan2g0838 465 MobiDBLite consensus disorder prediction 119 150 - -
Lan2g0838 465 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 173 188 IPR004827 GO:0003700|GO:0006355
Lan2g0838 465 MobiDBLite consensus disorder prediction 131 145 - -
Lan2g0838 465 Pfam bZIP transcription factor 170 207 IPR004827 GO:0003700|GO:0006355
Lan2g0838 465 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 168 212 IPR004827 GO:0003700|GO:0006355
Lan2g0838 465 ProSiteProfiles DOG1 domain profile. 235 451 IPR025422 GO:0006351|GO:0043565
Lan2g0838 465 SMART brlzneu 166 229 IPR004827 GO:0003700|GO:0006355
Lan2g0838 465 Pfam Seed dormancy control 253 327 IPR025422 GO:0006351|GO:0043565
Lan2g0838 465 CDD bZIP_HBP1b-like 170 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0838 Lan-Chr2 18487044 18491775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0838 3 454 bZIP Transcription Factor Family AT1G68640 57.143 1.93e-168 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan2g0838 DOG1 2.2e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0838 K14431 - gmx:100777181 664.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0728 11 6427041 6430740 Lan2g0838 2 18487044 18491775 LSH
Lan2g0838 2 18487044 18491775 Lan9g0933 9 15658583 15662470 LSH