Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0834 ATGGATCGAGAATGGGGTTCAAAGCCTGGGAGCGGTGGCGCCGCCACCGCTCAGAACGAAGCTATCGACCGTCGTGAGCGTCTCCGGCGTCTGGCCCTTGAGACAATTGATCTCGCTAAAGACCCCTATTTCATGCGCAATCATCTTGGCAGCTATGAATGCAAGCTTTGTTTGACACTGCATAACAATGAGGGGAACTACTTGGCCCACACTCAGGGAAAGCGCCATCAGACTAATTTGGCTAAGAGAGCTGCTCGCGAAGCCAAAGACGCTCCCGCTCAACCTCAACCTCACAAGCGCAATGTTTCTGTTCGCAAGACAGTCAAGATTGGTCGGCCTGGGTACCGGGTGACTAAACAATATGATCAAGAGACAAAGCAAAGATCTCTTCTATTCCAGATTGAATATCCTGAGATTGAAGACCTTTCAAAGCCAAGGCACCGATTTATGTCTTCTTACGAACAGAGGGTGCAACCATTTGATAAAAGTTACCAGTATCTTTTGTTTGCAGCTGAGCCATACGAAATAGTTGCTTTCAAGGTACCTAGCACAGAGATTGATAAATCCACCCCAAAGTTCTTCTCACACTGGGACCCAGACTCAAAGATGTTCACACTGCAGTTGTATTTTAAAACCAAGCCACCGGAGGCAAATAAACCGCAACCTCCCTCTACAGCCAATGGCACAGAAGCACCAGGTGTTCCACCAAGGCCTTTGGCCCCGCCACCCCAAGCTCCACCACCACCTCCTCCACAAGGGCTTCCTCCTGGTGCACCTATGGGAAATCCTCCCAGAGCTCCTCCTCCGATGCCAGGATCCTTGCCACCTCCACCTCCAATGGCAGCAAATGGTCCTAGACCAGCACCTCCCAGTGGAATGCCATCTATCCCACCCCCACCCCCCTCAACAGCCAGTTTCAACATGGGTGCCAGGCCTCCAATGCCACCTCCACAAGGTTTTCTGGGCCAACAGATACAAGGTCTCGGTGTCCGTCCACCTCCACCACCCCCTAATATGGGACATTAG 1026 0.5175 MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPHKRNVSVRKTVKIGRPGYRVTKQYDQETKQRSLLFQIEYPEIEDLSKPRHRFMSSYEQRVQPFDKSYQYLLFAAEPYEIVAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKTKPPEANKPQPPSTANGTEAPGVPPRPLAPPPQAPPPPPPQGLPPGAPMGNPPRAPPPMPGSLPPPPPMAANGPRPAPPSGMPSIPPPPPSTASFNMGARPPMPPPQGFLGQQIQGLGVRPPPPPPNMGH* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0834 341 MobiDBLite consensus disorder prediction 213 341 - -
Lan2g0834 341 SUPERFAMILY beta-beta-alpha zinc fingers 48 82 IPR036236 -
Lan2g0834 341 Gene3D - 94 218 - -
Lan2g0834 341 PANTHER SPLICING FACTOR 3A SUBUNIT 2 1 332 - -
Lan2g0834 341 SMART ZnF_U1_5 49 83 IPR003604 GO:0003676|GO:0008270
Lan2g0834 341 MobiDBLite consensus disorder prediction 1 21 - -
Lan2g0834 341 MobiDBLite consensus disorder prediction 234 319 - -
Lan2g0834 341 ProSiteProfiles Zinc finger matrin-type profile. 52 82 IPR000690 GO:0003676|GO:0005634|GO:0008270
Lan2g0834 341 SMART CactinC_cactus_3 89 217 - -
Lan2g0834 341 Gene3D Classic Zinc Finger 46 89 - -
Lan2g0834 341 Pfam Zinc-finger of C2H2 type 52 76 - -
Lan2g0834 341 Pfam Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) 110 204 IPR031781 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0834 Lan-Chr2 18411404 18415838 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0834 1 228 C2H2 Transcription Factor Family AT2G32600 89.474 3.04e-143 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0834 K12826 - gmx:100791333 453.751