Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0830 ATGGATGAAGGTAGTTGCAATGATGAAAGCACCACAACTGAATCACTTTCTATAACCCTCCCTCCCACAACAACCCTATTACCATTCCCCACAATATCAAAGAACATGTCACCGCCACCATCCAATAGTCTTTGTCGCATTGGCAGTGGTGCCAGTGCAATAATTGACTCGGATGGTAGTAGTGGCACGGAAGCCGAGTCTCGGAAACTCTCATCTTCCAAATATAAAGGTGTGGTTCCCCAGCCAAACGGACGTTGGGGCGCTCAGATTTACGAGAAACACCAACGTGTTTGGCTGGGTACCTTTAACACAGAAGAGGAAGCCGCAAAAGTCTATGACATTGCGGCTCATCGCTTCCGTGGCAAGGACGCCATAACAAACTTCAAGGCCCTCGACGGTGGCAACGATGACATAGAGGCTGAGTTCCTCAACTTGCATTCGAAATCCGAGATCGTCGACATGCTGAGGAAGCACACCTACAATGGCGAGCTGGACCAGAGCAAGCGAAACCTAGGCTTCTTCGATCGGCGTCTCAGCCGCGGCACCGCCGCGAACACCGGTGGCGCGTGCGGAAACACGGCGCGTGAGCAGCTTTTCGAAAAAACAGTTACTCCGAGCGACGTAGGGAAGCTGAACCGGTTAGTTATACCGAAGCAACACGCGGAGAAGCACTTTCCGTTACAAAACGGTGTTAACGGAATCGCAGCGGGGAAAGGGGTTCTATTGAACTTTGAAGACGTTGGAGGGAAAGTGTGGCGTTTCCGTTACTCTTATTGGAATAGTAGCCAAAGCTATGTTCTCACTAAAGGGTGGAGCCGGTTCGTTAAGGAGAAAAATCTGAAAGCCGGTGATTCGGTTTGTTTCTATAAGTCGACCGGACCGGATAATCAGATGTTTATTGACTGGAAAGTAAGGAATGTTAATGAGGTTGGGTTGGTTGAACCGGGTTTTGAACCGGTTCAGGTGGTTCGGCTTTTTGGGGTGAACATATTAAAACTACCTGGGTCTGATGCTAATGGTAATAATAATGCTAGTAGTATTGGTGGATGCTGCAATGGGAAGAGGAGAGAGATGGAAACGTTTACATTAGAGTGTACCAAGAAGCCTAAGATAGTTTTGTAA 1122 0.484 MDEGSCNDESTTTESLSITLPPTTTLLPFPTISKNMSPPPSNSLCRIGSGASAIIDSDGSSGTEAESRKLSSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNTEEEAAKVYDIAAHRFRGKDAITNFKALDGGNDDIEAEFLNLHSKSEIVDMLRKHTYNGELDQSKRNLGFFDRRLSRGTAANTGGACGNTAREQLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLQNGVNGIAAGKGVLLNFEDVGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDSVCFYKSTGPDNQMFIDWKVRNVNEVGLVEPGFEPVQVVRLFGVNILKLPGSDANGNNNASSIGGCCNGKRREMETFTLECTKKPKIVL* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0830 373 Pfam B3 DNA binding domain 199 299 IPR003340 GO:0003677
Lan2g0830 373 Pfam AP2 domain 73 121 IPR001471 GO:0003700|GO:0006355
Lan2g0830 373 PANTHER AP2/ERF AND B3 DOMAIN TRANSCRIPTION FACTOR 1 372 - -
Lan2g0830 373 MobiDBLite consensus disorder prediction 29 48 - -
Lan2g0830 373 MobiDBLite consensus disorder prediction 55 76 - -
Lan2g0830 373 Gene3D AP2/ERF domain 73 130 IPR036955 GO:0003700|GO:0006355
Lan2g0830 373 ProSiteProfiles AP2/ERF domain profile. 74 129 IPR001471 GO:0003700|GO:0006355
Lan2g0830 373 MobiDBLite consensus disorder prediction 1 23 - -
Lan2g0830 373 CDD AP2 73 131 IPR001471 GO:0003700|GO:0006355
Lan2g0830 373 SUPERFAMILY DNA-binding domain 73 129 IPR016177 GO:0003677
Lan2g0830 373 ProSiteProfiles B3 DNA-binding domain profile. 199 306 IPR003340 GO:0003677
Lan2g0830 373 MobiDBLite consensus disorder prediction 8 23 - -
Lan2g0830 373 SMART rav1_2 74 135 IPR001471 GO:0003700|GO:0006355
Lan2g0830 373 SUPERFAMILY DNA-binding pseudobarrel domain 198 300 IPR015300 -
Lan2g0830 373 CDD B3_DNA 198 291 IPR003340 GO:0003677
Lan2g0830 373 PRINTS Ethylene responsive element binding protein signature 75 86 IPR001471 GO:0003700|GO:0006355
Lan2g0830 373 PRINTS Ethylene responsive element binding protein signature 95 111 IPR001471 GO:0003700|GO:0006355
Lan2g0830 373 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 1 372 IPR044800 GO:0003700
Lan2g0830 373 Gene3D - 189 313 IPR015300 -
Lan2g0830 373 SMART B3_2 199 306 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0830 Lan-Chr2 18288718 18290216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0830 1 372 B3 DNA Binding Superfamily AT1G25560 58.793 3.42e-140 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-RAV Lan2g0830 B3 1.9e-28 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0830 K09287 - gmx:100776987 516.924