Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0827 ATGGCCACCGTTGCAACTAGAGGAATTGGAGTAGGAGTACCAAAGCTCCAACCCCACAAACCCAAACACAAGTCTTTGTTTCTTGGCCATAGACTAAGAACAAGACCCTTTACTGAGCCACCATGCAGTGCAACTTTAACTATCTCAAGAAACTCAAAGTCTTTTCAAGTTTCTGCATTAGGAGCTGAATGGGTTGATTCAATTCACAACCTTTTTGTGGGTGTTGGTGTTGGTCTTCCATGCACTGTGATGGAGTGTGGTGATATAATATATAGAAGCACTCTTCCTAAGTCCAATGGTTTGACACTTACAGTTCCTGGTGTGGTTCTGGCTTTGAGTGCTCTTTCTTATCTCTGGGCTACACCTGGTGTTGCTCCTGGTTTCTTTGACATGTTTGTTCTTGCTTTTGTTGAAAGGTTGTTTAAGCCTACTTACAAAAAGGATGATTTTGTTCTAGGGAAGAAGCTGGGGGAGGGAGCCTTTGGAGTCGTCTATAGAGTGACACTTGCCAACAAGCCCTCTTCTAAGGAAGGTGATTTAGTCTTGAAGAAGGCAACTGAATATGGTGCTGTTGAAATTTGGATGAATGAGCGTGTGCGAAGAGCTTGTGCAAACAGTTGTGCAGATTTTGTTTATGGTTTTCTCGAGACCTCTGCAAAGAAAGGTTCTGAATACTGGCTTGTCTGGCGGTTTGAAGGGGATGCCACCCTAGCTGACCTGGTGCAGAGTAGAGAATTTCCATATAATGTCGAAACACTGATTCTGGGTAAGATCCAGGACTTGCCGAAGGGATTGGAAAGAGAAAATAGAATCATTCAAACAATCATGAGGCAACTCTTGTTTGCATTGGATAGTCTTCATTCAACTGGTATTGTGCACAGGGATATTAAGCCGCAGAACATTATTTTCTCTGAAGGGTCTCGTACATTCAAAATCATTGATCTTGGAGCTGCTGCCGATCTGCGAGTTGGCATCAACTACATTCCTAAGGAATTTCTTTTGGATCCAAGATACGCTGCACCAGAGCAGTACATCATGAGCACACAAACTCCGTCTGCACCCTCGGCTCCAGTAGCAACTGCACTTTCCCCAGTTTTATGGCAGTTGAATTTGCCCGACAGATTCGACATCTATAGTGCTGGTCTAATCTTCCTTCAAATGGCATTCCCGAGTTTACGCACTGATAACGGCCTCATACAATTCAACCGTCAGTTAAAGAGGTGTGACTATGACTTAGTTGCTTGGAGAAAAAGCGTAGAGCCTCGATGCGGAGCTGAACTTAGGAGGGGCTTTGAGCTGTTAGATTTAGATGGTGGAATAGGATGGGAACTTCTGACATCAATGGTCCGTTACAAAGCAAGGCAACGGTTAAGTGCAAAAGCAGCATTAGCTCATCCTTTCTTTGTCAGAGAAGGCTTGTTGGCATTGTCTTTCATGCAAAATCTGAGGCTGCAACTCTTACGTGCAACTCAGAAGGATTATGGGGAAGCTGCAAAGTGGATTATTCAGCTAATGGCGAAATCGGGAACAGAGAAGGATGGTGGATTTACTGAAGCTCAGCTCCAGGAACTGAGAGAAATTGAACCCAAGAAGAAGAAAGGTAATTCAAAGAAAAATGGTCTAGCTTCAGTACTTAAGCTTCAGAGGAAAATTATAAAAACCTTAAATGAGAGTATGGATGAGCTCAACAGACGCAGGAAAAGCCTTTGGTGGAGCAGATGGATCCCAAAAGAGGAATGA 1740 0.4368 MATVATRGIGVGVPKLQPHKPKHKSLFLGHRLRTRPFTEPPCSATLTISRNSKSFQVSALGAEWVDSIHNLFVGVGVGLPCTVMECGDIIYRSTLPKSNGLTLTVPGVVLALSALSYLWATPGVAPGFFDMFVLAFVERLFKPTYKKDDFVLGKKLGEGAFGVVYRVTLANKPSSKEGDLVLKKATEYGAVEIWMNERVRRACANSCADFVYGFLETSAKKGSEYWLVWRFEGDATLADLVQSREFPYNVETLILGKIQDLPKGLERENRIIQTIMRQLLFALDSLHSTGIVHRDIKPQNIIFSEGSRTFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPSLRTDNGLIQFNRQLKRCDYDLVAWRKSVEPRCGAELRRGFELLDLDGGIGWELLTSMVRYKARQRLSAKAALAHPFFVREGLLALSFMQNLRLQLLRATQKDYGEAAKWIIQLMAKSGTEKDGGFTEAQLQELREIEPKKKKGNSKKNGLASVLKLQRKIIKTLNESMDELNRRRKSLWWSRWIPKEE* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0827 579 Gene3D Transferase(Phosphotransferase) domain 1 259 472 - -
Lan2g0827 579 ProSitePatterns Serine/Threonine protein kinases active-site signature. 291 303 IPR008271 GO:0004672|GO:0006468
Lan2g0827 579 Coils Coil 545 565 - -
Lan2g0827 579 ProSitePatterns Protein kinases ATP-binding region signature. 156 183 IPR017441 GO:0005524
Lan2g0827 579 Gene3D Phosphorylase Kinase; domain 1 135 230 - -
Lan2g0827 579 SUPERFAMILY Protein kinase-like (PK-like) 134 470 IPR011009 -
Lan2g0827 579 SMART serkin_6 150 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g0827 579 CDD STKc_SNT7_plant 154 468 - -
Lan2g0827 579 Pfam Protein kinase domain 151 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g0827 579 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 19 579 IPR044803 GO:0004674|GO:0009579
Lan2g0827 579 ProSiteProfiles Protein kinase domain profile. 150 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g0827 579 PANTHER SERINE/THREONINE-PROTEIN KINASE STN7, CHLOROPLASTIC 19 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0827 Lan-Chr2 18212061 18217613 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0827 268 468 Core Cell Cycle Gene Families AT2G38620 30.189 1.28e-14 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Lan2g0827 Pkinase 2.5e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0827 - - gmx:100778588 974.156