Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0826 ATGGCTAGACCATCATGGTTGGTGGACAAAAGTAGAATTGCAACGAAAATAAAGAGTGCTTCAGGTGCATGTGATCCTGAGAAAGTTGTATTCAAAAGCAATCCTACTAAGGCTTGCCCAAATTGTCAACATGCTATTGACAACAGTGATGTAGCGCAAGAGTGGCCTGGCTTACCGAAAGGGGTGAAATTCGATCCATCTGATCAGGAGATCATTTGGCATTTGATTGCAAAAGTTAGTGAAGGGAATTCGAAACCTCATCCTTTCATTGATGAATTTATTACTACTATTGAAGGGGCTGATGGAATCTGTTCCACTCATCCTAAAAACTTACCTGGTGTTAAGCAAGATGGAAGTATTTCCCACTTCTTCCATCGAGCAATCAAGGCTTATAATACTGGGAACCGAAAGCGTAGAAAAATACAAGGTTGTGATTCTGGTGATCTTCGCTGGCACAAGACTGGAAAAACTAAACAAATCAAATGGAACGGTGTTACGAAAGGATATAAAAAGATTATGGTTCTGTATGCGAGCAAAACAGGTAAAACTAATTGGGTTACACATCAGTACCACCTAGGAACGGAGCAGGATGAAAAGGATGGGGAGTATGTTATCTCTAAAGTGTTTTATCAGCAAGACAAATTGGGTGATAAAGATGATGAGGATATTTCTGAAACCAGTGAAGCAACAATTTTGAACGTGGACCCAATCACTCCCAAATCTTTGACTCCTGTCCCTCCCTGTAACGAAGGACCATGTTCAGATGTGGACCTAGTCACTCCGAAATCTGCGATTCCTAACCCTTCCTGTAACGGAAGTTCTTGTTCAGATGTAGACCTAGGACAAGGAACACATCTCATGCCTCAGATGGAGTGTTTGGATGAAATTATAACTGACTGTGAAGGGCTTGAAAAAACTGATGTCTCTACTGTGGAAACTGAACATAACAAAGGGATGGATAATGATGAAAATAATGCTGATGATGGCCAAAAATGGTGGGACAGTGAGTCACAGAATCTGTTGAGTTCGCAACAACTCGTCGAAGCATTGTCCATGTGTGATGATCTCCTTCAAAGCCAGTCTCCTACTAGGGATGGGAAAAACGGAGAACATAAGGACCAACCTGGTCTCTCTATTTATGCTCATCTAGGACCAGACTATCTGAAGAAGGATATTGAAGAGTGCCAAAGTCTTGCCCTTGACGTTGCAAATACCGATGACACACCTTCAGAATTTCGACTAAGTCAGCTGGAATTTGGTTCACAGGACAGCTTTATCGCCTGGGGTGGCAGCAAGGCAATATAA 1305 0.4207 MARPSWLVDKSRIATKIKSASGACDPEKVVFKSNPTKACPNCQHAIDNSDVAQEWPGLPKGVKFDPSDQEIIWHLIAKVSEGNSKPHPFIDEFITTIEGADGICSTHPKNLPGVKQDGSISHFFHRAIKAYNTGNRKRRKIQGCDSGDLRWHKTGKTKQIKWNGVTKGYKKIMVLYASKTGKTNWVTHQYHLGTEQDEKDGEYVISKVFYQQDKLGDKDDEDISETSEATILNVDPITPKSLTPVPPCNEGPCSDVDLVTPKSAIPNPSCNGSSCSDVDLGQGTHLMPQMECLDEIITDCEGLEKTDVSTVETEHNKGMDNDENNADDGQKWWDSESQNLLSSQQLVEALSMCDDLLQSQSPTRDGKNGEHKDQPGLSIYAHLGPDYLKKDIEECQSLALDVANTDDTPSEFRLSQLEFGSQDSFIAWGGSKAI* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0826 434 PANTHER SUPPRESSOR OF GAMMA RESPONSE 1 2 429 - -
Lan2g0826 434 MobiDBLite consensus disorder prediction 358 377 - -
Lan2g0826 434 ProSiteProfiles NAC domain profile. 58 211 IPR003441 GO:0003677|GO:0006355
Lan2g0826 434 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 2 429 IPR044799 GO:0003700
Lan2g0826 434 MobiDBLite consensus disorder prediction 311 330 - -
Lan2g0826 434 SUPERFAMILY NAC domain 43 211 IPR036093 GO:0003677|GO:0006355
Lan2g0826 434 Pfam No apical meristem (NAM) protein 59 192 IPR003441 GO:0003677|GO:0006355
Lan2g0826 434 Gene3D NAC domain 67 215 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0826 Lan-Chr2 18182556 18187273 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0826 5 211 NAC Transcription Factor Family AT4G28500 51.142 5.92e-68 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan2g0826 NAM 9e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0826 - - gmx:100803236 625.935