Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0817 ATGGAAGGTAGCATTAGTTCTGAACTACCACCTGGTTTCAGGTTCCACCCAACAGATGAAGAATTAATTGTACACTACCTTTGTAACCAAGCCACATCAAAGCCATGCCCTGCTTCTATTATCCCAGAAGTTGATATCTATAAGTTTGATCCATGGGAATTGCCTGATAAATCAGACTTTGGAGAAAATGAATGGTATTTTTTTACTCCAAGGGACAGAAAGTATCCAAATGGAGTGAGGCCTAATAGAGCAACATTGTCTGGGTATTGGAAAGCAACTGGGACAGACAAAGCAATCTATAGTGGGTCTAAGCATATTGGTGTGAAGAAAGCTTTGGTTTTTTATAAGGGTAAGCCACCCAAAGGTGTTAAGACAGATTGGATTATGCATGAGTATAGATTGGTTGGATCACGAAGACAAACCAATAGACAAATTGGATCCATGAGGCTAGATGATTGGGTCTTGTGCAGGATCTACAAGAAGAAGAACATGGGAAAATCATTGGATCAAAGAGAGGAATACCCAATAGTACAAGTCAATCTAATAGGAGCAAATGATGAAACTGAACAAGAAATGATGAAATTTCCAAGGACTAATTCCCTTGCTAATTTATTGGACCAGGATTTCTTGGGTTCAATGTCACAGATACTATATGATGGATCATATAACTCAACCTTTGAGTATCAAATTAACACTGCTAATGTTGGGATACACAACTTTGTTAAACCTCAGCCAGTTGAATTCCCTAATTCTTATGCAGCAGATTCAGGGAAGTACCAAGTGAAACAGAACAGCACCATAAACCAGACCTTATTTGTTAACCAATTGTATGATCAGACAAAACATTACCAATAA 855 0.3801 MEGSISSELPPGFRFHPTDEELIVHYLCNQATSKPCPASIIPEVDIYKFDPWELPDKSDFGENEWYFFTPRDRKYPNGVRPNRATLSGYWKATGTDKAIYSGSKHIGVKKALVFYKGKPPKGVKTDWIMHEYRLVGSRRQTNRQIGSMRLDDWVLCRIYKKKNMGKSLDQREEYPIVQVNLIGANDETEQEMMKFPRTNSLANLLDQDFLGSMSQILYDGSYNSTFEYQINTANVGIHNFVKPQPVEFPNSYAADSGKYQVKQNSTINQTLFVNQLYDQTKHYQ* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0817 284 PANTHER NAC DOMAIN-CONTAINING PROTEIN 1 1 234 - -
Lan2g0817 284 ProSiteProfiles NAC domain profile. 9 161 IPR003441 GO:0003677|GO:0006355
Lan2g0817 284 Gene3D NAC domain 18 166 IPR036093 GO:0003677|GO:0006355
Lan2g0817 284 Pfam No apical meristem (NAM) protein 10 134 IPR003441 GO:0003677|GO:0006355
Lan2g0817 284 SUPERFAMILY NAC domain 6 161 IPR036093 GO:0003677|GO:0006355
Lan2g0817 284 PANTHER NAC TRANSCRIPTION FACTOR 56 1 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0817 Lan-Chr2 17903613 17905233 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0817 1 216 NAC Transcription Factor Family AT1G69490 65.351 5.04e-109 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan2g0817 NAM 2.5e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0817 - - gmx:100170717 482.641