LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan2g0795	ATGGGGCAAAGAGAGATCTTTGTTCATGTGGTGATTTTATTTTTTATGGTCTTACTTAGATGTAGTTATGGAGTTATGAAAGCAGAAGGAGGAGGAGAAGAAGAAGAAGCTGATAGGATTTTGGAACTTCCTGGGCAACCCAAAGTTTCTTTTCAGCAATTCTCTGGCTATGTTACCGTGGATAATGTTGCTGGTAGAGCACTTTTTTATTGGCTTACTGAAGCTGCACAAAAACCTCTCACCAAACCCCTTGTCATTTGGCTCAATGGAGGTCCTGGTTGTTCATCTGTGGCATATGGAGCATCAGAGGAAATTGGGCCATTTAGAATAAATAAAACAGCTTCAGGGCTTTACATCAACAAATTCTCATGGAACACCATCTCCAACCTTTTATTCTTGGAAACCCCTGCTGGTGTTGGCTTCTCCTACACCAACCGCTCCTCGGATCTTCTCGACACCGGTGATCGCCGAACTGCCAAAGATTCTCTTGAATTCATAATCCAATGGCTAGAAAGATTCCCCCGTTATAAGAATAGGGAACTTTATATCAGTGGAGAAAGCTATGCAGGCCACTATGTTCCTCAGTTAGCCAAAGAAATCATGATCTATAATTCACAAACCAAGCAACCCCTCAATCTCAAAGGAATAATGGTTGGCAATGCAGTAACAGACACTTACTATGATAACTTGGGCACAGTGAATTACTGGTGGAGTCATGCTATGATCTCCGACCAGACATATCAGCAACTCATGAGCACATGTGATTTTCACCAGCAAAAGGAATCGGAGCAGTGTGAGACTCTTTATAGCTATGCCATGGATCAAGAATTTGGCAACATTGATCAATACAACATCTATGCACCTCCTTGCAACAACTCCGACGGCAGCTCTACCACCCGCCGCAACATGCGGTTACCTCACCGCCCCCATCTGGGTTTTAGGAATTTGTATGGTTATGATCCATGTACTGAAAAGTATGCAGAGATTTACTATAATAATCCAGATGTTCAGAAAGCACTTCATGCTAACACAACTGGCATTTCTTATAAGTGGACTGCTTGCAATGAGCTTTTGAATCGAAACTGGAATGATTCAGATAAATCTATCCTTCCAATTTACAGAGAGTTGATGGCTCATGGAATAAGAATTTGGGTGTTCAGTGGGGATGTAGATTCAGTGGTGCCTGTTACAGCAACTAGATATTCCCTTTCACAGCTTAAGTTGACAACTAAAGTGCCATGGTATCCTTGGTATGTCAAAAATCAGGTTGGAGGGTGGACAGAGGTATATGAAGGGTTAACATTTGCCACTGTGAGAGGAGCTGGCCATGAAGTCCCAATGTTCAAGCCTAGAGCAGCTCTTCAGTTATTCAAATCATTTCTAGCAGGAAAACCTCTCCCTAGGTCATAA	1410	0.4241	MGQREIFVHVVILFFMVLLRCSYGVMKAEGGGEEEEADRILELPGQPKVSFQQFSGYVTVDNVAGRALFYWLTEAAQKPLTKPLVIWLNGGPGCSSVAYGASEEIGPFRINKTASGLYINKFSWNTISNLLFLETPAGVGFSYTNRSSDLLDTGDRRTAKDSLEFIIQWLERFPRYKNRELYISGESYAGHYVPQLAKEIMIYNSQTKQPLNLKGIMVGNAVTDTYYDNLGTVNYWWSHAMISDQTYQQLMSTCDFHQQKESEQCETLYSYAMDQEFGNIDQYNIYAPPCNNSDGSSTTRRNMRLPHRPHLGFRNLYGYDPCTEKYAEIYYNNPDVQKALHANTTGISYKWTACNELLNRNWNDSDKSILPIYRELMAHGIRIWVFSGDVDSVVPVTATRYSLSQLKLTTKVPWYPWYVKNQVGGWTEVYEGLTFATVRGAGHEVPMFKPRAALQLFKSFLAGKPLPRS*	470

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan2g0795	469	ProSitePatterns	Serine carboxypeptidases, histidine active site.	433	450	IPR033124	GO:0004185
	Lan2g0795	469	Gene3D	-	322	359	-	-
	Lan2g0795	469	Gene3D	-	369	463	-	-
	Lan2g0795	469	SUPERFAMILY	alpha/beta-Hydrolases	36	467	IPR029058	-
	Lan2g0795	469	Pfam	Serine carboxypeptidase	45	462	IPR001563	GO:0004185\|GO:0006508
	Lan2g0795	469	PANTHER	SERINE CARBOXYPEPTIDASE-LIKE 25	16	468	-	-
	Lan2g0795	469	Gene3D	alpha/beta hydrolase	34	292	IPR029058	-
	Lan2g0795	469	ProSitePatterns	Serine carboxypeptidases, serine active site.	183	190	IPR018202	GO:0004185
	Lan2g0795	469	PRINTS	Carboxypeptidase C serine protease (S10) family signature	120	132	IPR001563	GO:0004185\|GO:0006508
	Lan2g0795	469	PRINTS	Carboxypeptidase C serine protease (S10) family signature	133	143	IPR001563	GO:0004185\|GO:0006508
	Lan2g0795	469	PRINTS	Carboxypeptidase C serine protease (S10) family signature	169	194	IPR001563	GO:0004185\|GO:0006508
	Lan2g0795	469	PRINTS	Carboxypeptidase C serine protease (S10) family signature	433	446	IPR001563	GO:0004185\|GO:0006508
	Lan2g0795	469	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	16	468	IPR001563	GO:0004185\|GO:0006508

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan2g0795	Lan-Chr2	17373899	17381775	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan2g0795	327	466	Calmodulin-binding Proteins	AT2G22960	31.915	9.22e-17	76.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan2g0795	K16297		-	gmx:100807680	841.647