Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0786 ATGGAAGGGAAAAGCCAAGAAATGTGTGGCTTCAATACTCATACAAATGAGCTGCAAAATTCAAGTACACACAAGCAATCCTTTTCTCTTTCTTTTGCAAAGCTTGCTGAGAATTACCCTCATGGCTTTCCCAAAAAGGTATTTGCAGAGATAATAGGCACATATATTTTGGTGTTTGTGGGAAGTGGTTCAGCTGCACTAAATGCTATTGATGAAAACAAAGTTTCAAGATTGGCAGCTTCACTTGCAGGAGGGTTCATAGTGACTGTCATGATTTATTCAATTGGTCACATCTCAGGAGCACATATGAACCCAGCTGTGTCCTTAGCTTTTGCTGCAGTGAGGCATTTTCCATGGAGACAGGTCCCATTTTACATTGCAGCACAACTCACAGGAGCTATTTCTGCATCATATACTCTGCGAGCGCTGTTAGAACCATCGAGAGAGCTCGGAGCTACGTCGCCTTCCGGATCAAATATTCAAGCATTGATCATGGAAATGGTGGCAACATTCACCATGGTGTTCATATCCACTGCCATGGCCTATGACACAAAAGCTATAGGAGAGCTAGCTGGAGTTGCAGTAGGTTCTTCGGTTAGCATCGCGAGCATTGTTGCTGGACCAATATCAGGGGGATCAATGAACCCAGCAAGGACATTAGGTCCTGCAATTGCCACTGCATCCTACAAGGGAATTTGGGTCTATCTAGTTGGACCAATTACTGGGGCACTTTTAGGGGCATGGAGTTATGGTGCTATTGAAGAGACTGATAAGCCAGCTTCCGCAATCTCACTATCTTCCCTTTCAATCAAGCTATGCCGCCACCCGACGATTAATGAAACGGAGCAAGTTGGTAACAACAGCCACCTCAGTTCAGTGTGA 882 0.4478 MEGKSQEMCGFNTHTNELQNSSTHKQSFSLSFAKLAENYPHGFPKKVFAEIIGTYILVFVGSGSAALNAIDENKVSRLAASLAGGFIVTVMIYSIGHISGAHMNPAVSLAFAAVRHFPWRQVPFYIAAQLTGAISASYTLRALLEPSRELGATSPSGSNIQALIMEMVATFTMVFISTAMAYDTKAIGELAGVAVGSSVSIASIVAGPISGGSMNPARTLGPAIATASYKGIWVYLVGPITGALLGAWSYGAIEETDKPASAISLSSLSIKLCRHPTINETEQVGNNSHLSSV* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0786 293 ProSitePatterns MIP family signature. 102 110 IPR022357 -
Lan2g0786 293 Pfam Major intrinsic protein 43 250 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan2g0786 293 PRINTS Major intrinsic protein family signature 45 64 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan2g0786 293 PRINTS Major intrinsic protein family signature 84 108 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan2g0786 293 PRINTS Major intrinsic protein family signature 121 140 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan2g0786 293 PRINTS Major intrinsic protein family signature 165 183 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan2g0786 293 PRINTS Major intrinsic protein family signature 196 218 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan2g0786 293 PRINTS Major intrinsic protein family signature 233 253 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan2g0786 293 PANTHER AQUAPORIN NIP2-1 23 268 IPR034294 -
Lan2g0786 293 PANTHER MAJOR INTRINSIC PROTEIN, AQUAPORIN-LIKE PROTEIN-RELATED 23 268 - -
Lan2g0786 293 MobiDBLite consensus disorder prediction 1 22 - -
Lan2g0786 293 CDD MIP 45 250 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan2g0786 293 Gene3D Glycerol uptake facilitator protein. 5 262 IPR023271 -
Lan2g0786 293 MobiDBLite consensus disorder prediction 8 22 - -
Lan2g0786 293 SUPERFAMILY Aquaporin-like 39 257 IPR023271 -
Lan2g0786 293 TIGRFAM MIP: MIP family channel proteins 49 250 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0786 Lan-Chr2 17127075 17134003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0786 45 267 Major Intrinsic Protein MIP AT5G37820 47.768 3.04e-71 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0786 K09874 - gmx:100795261 352.058