Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0768 ATGGAGAAAGATCAGAACTATTCGGCACCCATGCCTCCAAGTTTCAACACACTTGAATACTCTCTTGATAATCAAAACCATAACCATTTCTATCCACAACAACAACAAATGAAGTTTCGAATAGGCGAAACTTCTAGCGAAAACAACAACCTTATGGTTGATTACATGCCTCAACAACAACCACCACCACAAATATCACCATCAGGGTTTTATGGTGCAACTAGTTTTGATAAACTGAGTTTTGCAGACGTGATGCAGTTTGCGGATTTCGGACCCAAATTAGCCTTAAATCAAGCCAAGAATTGCGAAGAAACTGGGATCGACCCCATTTGCTTCCTCAAGTTTCCTGTCTTGAATGACAAAAAATTGATGGTGAACAACATAGAAGCCGGTGATGAAGAAGCACAAAATGATGATGAGAGGTTCAACATGATGAGCATGGAAGATAAGTCAAGAGTAGGTGCAAGTGCAGAGGAAGAAATGATTAGACAAGATGAAGAAACTTGGGTTTCTGATGATAACAACTCAATGCAGATTCGGTTTCTTGGGCATGAAGAACTCCAGAATAGGAATTCTACGGTGAAGGAGAACAAGAACAAAAGGAAGAGGCCAAGAACTGAGAAAACAAGTGAAGAAGTTGAGAGCCAACGCATGACTCACATAGCAGTTGAAAGGAACCGAAGGAAGCAAATGAATGAGCATCTTCGTGTTCTCAGATCCCTCATGCCTGGTTCTTACGTGCAGAGGGGTGATCAAGCATCTATAATTGGGGGAGCCATAGAGTTTGTGAGGGAATTGGAGCAACTTCTACAATGCTTAGAATCACAGAAGAGGAGAAGAATACTTGGAGAAGCACAATCAAGACAAGTTGGTGATCCATATCTTGAAACACAACAACCTATTCAACCTCCATTCTGTCCAACTTTGCCAAATGATCAGATGAAGCTTGTTGAGTTAGAGACCGGAATTCGCGAAGAAACCGTGGAGAACAAGTCTTGTTTGGCTGATGTAGAAGTGAAGCTTCTAGGGTTTGATGCAATAATCAAAATCCTATCAAGAAGGAGACCAGGACAATTGATCAAGACCATTGCTGCACTTGAAGATCTTCAGCTAATTATCCTTCATACCAATATCACCACTATTGACCAAACAGTTCTTTATTCATTCAATGTCAAGGTTGCTAGTGATTCAAGGTTCACAGCAGAAGATATAGCTAGCTCCATTCAGCAGATATTCAGTTTTATCCATGCAAACACTAGCATGTGA 1266 0.4084 MEKDQNYSAPMPPSFNTLEYSLDNQNHNHFYPQQQQMKFRIGETSSENNNLMVDYMPQQQPPPQISPSGFYGATSFDKLSFADVMQFADFGPKLALNQAKNCEETGIDPICFLKFPVLNDKKLMVNNIEAGDEEAQNDDERFNMMSMEDKSRVGASAEEEMIRQDEETWVSDDNNSMQIRFLGHEELQNRNSTVKENKNKRKRPRTEKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRILGEAQSRQVGDPYLETQQPIQPPFCPTLPNDQMKLVELETGIREETVENKSCLADVEVKLLGFDAIIKILSRRRPGQLIKTIAALEDLQLIILHTNITTIDQTVLYSFNVKVASDSRFTAEDIASSIQQIFSFIHANTSM* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0768 421 MobiDBLite consensus disorder prediction 203 218 - -
Lan2g0768 421 MobiDBLite consensus disorder prediction 184 218 - -
Lan2g0768 421 PANTHER TRANSCRIPTION FACTOR FAMA 30 421 - -
Lan2g0768 421 PANTHER TRANSCRIPTION FACTOR FAMA 30 421 IPR044283 GO:0003700|GO:0010052
Lan2g0768 421 SMART finulus 221 272 IPR011598 GO:0046983
Lan2g0768 421 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 215 281 IPR036638 GO:0046983
Lan2g0768 421 Gene3D - 188 280 IPR036638 GO:0046983
Lan2g0768 421 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 215 266 IPR011598 GO:0046983
Lan2g0768 421 Pfam Helix-loop-helix DNA-binding domain 216 267 IPR011598 GO:0046983
Lan2g0768 421 CDD ACT_UUR-ACR-like 347 411 - -
Lan2g0768 421 CDD bHLH_AtFAMA_like 218 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0768 Lan-Chr2 16201019 16216028 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0768 41 421 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G24140 61.386 2.35e-152 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan2g0768 HLH 9.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0768 - - gmx:100793349 583.563