LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan2g0753	ATGAACAATCAGTCACAACAAGAAGAACAAAAACAAAAACAAAGCAAATACAACAAACAAAAACTCCAAGATAATGAAGCAGAAGAAAACAGGTTGTTACATTCTGATTGCGAAACAATACCATTATCATCCCCACACTCGTTACCCTCAATCTCAAACAATGCAAATGCAGAAGAAGAAGATGCTGTATATGCAGCCAAAGACAAGGTTCATATATTCGACTTAGAGTCCGCCACTGGTTCCACGGTGGTGCCACCCTTCTCGTGGAAGAAGCTTTGGTTGTTCACAGGGCCAGGGTTGCTTATGAGCGTAGCATTTTTGGACCCTGGGAACTTGGAAGGGGATTTACAAGCTGGTGCAGTTGCAGGGTACTCGTTGCTTTGGCTATTGATGTGGTCAACCATAATGGGGTTGCTGATACAGCTTCTGTCGGCGAGGCTAGGGGTGGCGACGGGGCGGCACTTGGCGGAGCTGTGCAGGGAGGAGTATTCAAATTGGGCAAGGTTGGTGCTGTGGTTGTTGGCAGAGTTGGCATTGATTGCTGCTGATATTCAAGAGGTTATTGGAAGTGCTATTGCTCTTAAGATTCTTAGCAATGGATTTTTGCCCATTTGGGTTGGTGTCATTATCACTGCCTCAGATTGTTTCTTCTTTCTGTTTCTTGAGAACTATGGAGTAAGGAAGTTGGAAGGTGTTTTCGCAGTTTTCATTGGAACTATGGCCTTCTCTTTTGCTTGGATGTTCTTTGATACAAATCCCAGTGAAGAAGAACTTCTGATGGGTCTTTTGATCCCAAGAGTTAGCTCAAAAACACTTCGCCAAGCAGTGGAAATTGTTGGTTGTGTTATAACCCCACATAATGTTTTCCTCCATTCAGCATTAGTACAATCAAGGGACATTGATATCCATAACAAAAGCCAAGTTCAAGAGGCTATAAACTACTACTCAATTGAGTCCTCAGTTGCACTTTTAATCACTCTAGTGATCAATCTTTTCGTGATTACGGTTTTCGCAAGAGTGTTCTATGGTACAGAACAGGCCAAGGACATAGGACTAGTAAATGCAGGGCAATATCTTGAGGAGAAGTATGGTGGAGGTTTGTTTCCAATTCTCTATATATGGGGTATTGGTTTGTTAGCAGCTGGACAAAGTAGCACTATTACAGGCACATATGCAGGGCAATTTATAACAGAAGGGTTTCTGAATCTTAATATAAAGAAGTGGTTGAGGGCTTTGATTACTAGAAGTTGTGCAATTGTTCCAACTATGATTGTAGCAATTGTTTTTAATACATCAGAAGGTTCATTGGATACCTTGAATGAATGGCTTAATGTGCTTCAGGCAATACAAATTCCTTTTGCACTTATTCCTCTTCTTACTTTGGTGTCCAAAGAGGAAGTCATGGGAACCTTTAGAATAGGACCTGTAGTTGAGAGGGTGTCTTGGACTATATCAGTGCTGGTAATAATGATTTATGGATATCTGTTATTAGATTTCTTCCTCTCTGAAGTGAATGGAGTCCTATTTGGTTTTCTGGTGTGCCTTTGTTCTGCAGCATGGATAACATTTATTGCATATCTGGTTAAACATAGTGGTGCTGTTTCTTCTATGCTAGCAAGGTCCCCTAGTTCAAAAGGCTTTTTTTCTCTAGCTGGGAACTGA	1662	0.4134	MNNQSQQEEQKQKQSKYNKQKLQDNEAEENRLLHSDCETIPLSSPHSLPSISNNANAEEEDAVYAAKDKVHIFDLESATGSTVVPPFSWKKLWLFTGPGLLMSVAFLDPGNLEGDLQAGAVAGYSLLWLLMWSTIMGLLIQLLSARLGVATGRHLAELCREEYSNWARLVLWLLAELALIAADIQEVIGSAIALKILSNGFLPIWVGVIITASDCFFFLFLENYGVRKLEGVFAVFIGTMAFSFAWMFFDTNPSEEELLMGLLIPRVSSKTLRQAVEIVGCVITPHNVFLHSALVQSRDIDIHNKSQVQEAINYYSIESSVALLITLVINLFVITVFARVFYGTEQAKDIGLVNAGQYLEEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFITEGFLNLNIKKWLRALITRSCAIVPTMIVAIVFNTSEGSLDTLNEWLNVLQAIQIPFALIPLLTLVSKEEVMGTFRIGPVVERVSWTISVLVIMIYGYLLLDFFLSEVNGVLFGFLVCLCSAAWITFIAYLVKHSGAVSSMLARSPSSKGFFSLAGN*	554

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan2g0753	553	PANTHER	METAL TRANSPORTER NRAMP3 PROTEIN	46	553	-	-
	Lan2g0753	553	Hamap	Divalent metal cation transporter MntH [mntH].	78	500	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Lan2g0753	553	MobiDBLite	consensus disorder prediction	12	34	-	-
	Lan2g0753	553	PRINTS	Natural resistance-associated macrophage protein signature	171	197	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Lan2g0753	553	PRINTS	Natural resistance-associated macrophage protein signature	201	220	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Lan2g0753	553	PRINTS	Natural resistance-associated macrophage protein signature	226	247	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Lan2g0753	553	PRINTS	Natural resistance-associated macrophage protein signature	275	298	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Lan2g0753	553	PRINTS	Natural resistance-associated macrophage protein signature	382	401	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Lan2g0753	553	PRINTS	Natural resistance-associated macrophage protein signature	410	427	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Lan2g0753	553	PRINTS	Natural resistance-associated macrophage protein signature	444	463	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Lan2g0753	553	TIGRFAM	nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family	90	468	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Lan2g0753	553	PANTHER	SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER	46	553	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Lan2g0753	553	MobiDBLite	consensus disorder prediction	1	34	-	-
	Lan2g0753	553	Pfam	Natural resistance-associated macrophage protein	113	474	IPR001046	GO:0016020\|GO:0030001\|GO:0046873

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan2g0753	Lan-Chr2	15938340	15942505	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan2g0753	59	531	Inorganic Solute Cotransporters	AT1G47240	74.843	0.0	744

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan2g0753	K21398		-	gmx:100801411	909.057

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan9g0962	9	16145482	16147037	Lan2g0753	2	15938340	15942505	LSH