Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0749 ATGAGTGGAAATGGCAGGAATGGAACTGAAGAACACAAGAGAAAAGCTAATGATTGTTTTCTCAATCAAGGAGGGAAACAAAATATCCCAAAGTTACCTATTAAGAAGAACTGTCCAGAAAGCTTACCAAATGACAATGTGAATGATTCTGAACACATTGTTGGAGAGATACATGCAACAACATATAAGAATCCTAATCCAAGACAGCTTCAGAAGAATCAGTTAACTATTGAGTCTAGGTATAATAGCTTGATCAGAGAAATTGAACCAAAGATTGAAGAGCAGTTACCAGCGAAGTTAAGCAATAGACTTGAGGGGGTTGATTCAGAATCATGGGGAATGAAGACTTTGTCTACGCTTAAAGTTTCTGCAAATATAAGCAAGGTGGATAACATTATCACCTCAAGTAATGCACATCTTATTAGGAGTACAACACAGCAGAATAGTCTAACTACATATAATTTTTCTCAAATCATTTTGAAGCAAAAATTGAAGGGAAAAGGGATCGTTAGCAAAGATTTAGACAAAAGTACCAATCTTGGTGGATTACTTATGGGACCGGAGGATGAAAATCCTTCTTTTGAAGCCATGTTTCAACCCGGTACATTGCTAAGATCAAATGATGATGACGATAATAGGCCTTTCCTGCAAGCAATTGCAAAATCTGGAACAGAATCTTTTACTGATGGGCTCAACTTAAGAGAGTGGCTGAATTTTGAAGGTCATAAAATGAGTAAATCAGGAAGCATACTTATATTTAAGCAGATAATGGAATTGGTTGATTTTGCACACTCCCAAGGGATGGTCTTACAGGACTTAAGACCATCTTGTTTCACTTTATCGTCTTCAGGTAAAATTAAATACATTGGTTCATCAGGCCATCTAGATTTGGATAAAGTCATGACATACAATGTGACAAGGAAAAGGCCTATGGAACATGATATCTGTGCTTCCCAAAGTTTGAGCACAAAGTTGCAAAAGCCCTGTGAGGATACAAGAACTGTTTGGCAGCAGCAGCAGCATCACTTCACCGGTATTCATGGCTGCAGCACTACAACATTGAATCAAACTGACCCTTACATGAAAAGGCACATAGAATCAAGGAGTAAAGAAAGTTTGTGCCATAACGGTTCTAACTATCAACATACTTCTACTAAAGAAAAACAGTTTACATCTGTAACCATGCAGCTAGAAGAGAAGTGGTATTGTAGTCCAGAAGAGCTCAATGATGGAGTTTGCACATTTTCATCAAATATTTATAGCCTTGGAGTTCTTCTTTTTGAATTGTTATGCAATATTGAGTCATGGGAGGTGCACTCAGCTGTGATGTCAGATTTGGGTCATAGAATCTTACCACCAAGATTTCTATCAGAAAATTCAAAGGAAGCTGGATTTTGTCTTTGGCTTCTGCATCCCGATCCTTCCTCTCGCCCCAATACTAGGATGATTTTAGAGTCTGAGTTTATGCATGAATCAGAAGAGGCGAATTCTGGAGATGATATTGCAGTATCCGGTGAAGATGAAGTTGAAACAGAACAATTACTACATTTCTTAAGTTCACTTAAAGATGAAAAGCGAAAACAGGCAGCAAAGTTGGCAGAAGAACTAAGTTGTGTGGATGAAGATATTAAGGAGATAGAAAAAAGTTATTCTTTTAGGACAGATTCAGTATTTCCATTGGCAAAAATTAATTATCCTTCTTGTTCAGATGTTAGTAGATCTATTCCAAGTTCTTCTGCTAATGAATCAAGATTTATGAGTAATATAAATCAGCTAGAGAATTCTTACTTTTCCACGAGATTCCAAGTCCAGCTTAAAGAAGATTCAGCTGTTTCAAGCTATGATGAAGATGTTCTGGAAAGTAGATTGAGATTTCCTCATGTACGTAATTTAAATAAGGAGCCGAAAATAATTCAAAGTTCTGTGGGTCGTCTAGGATCCTTTTTTGAAGGTTTATGCAAGTTTTCTTGTTACAGCAAGTTCGAAGAGCTTGGTACATTAAGAAATAGAGATCTGCTTAGTTCTGCAAATGTAATTTGTGCTTTAAGTTTTGATCGTGATGAGGATTACATTGCAGCTGCTGGAGTTTCAAAGAAAATCAAGATTTTTGATTTGAGTACTATTTTATGTGATTCTGTTGATATTCAGTACCCCGTAGTTGAGATGTCGAATAAATCAAAGCTTAGCTGTGTGTGCTGGAATAGTTATATAAAAAATCATCTGGCATCGACCGACTATGATGGTGTGGTTCAGATGTGGGATGCAGGCACTGGTCAGCCATTGTCAAAATACATGGAACACCAAAAGAGAGCTTGGTCTGTTCACTTTTCTCTTTCTGACCCAAAATTGTTTGCAAGTGGAAGCGACGACTGCTCTGTCAAACTGTGGAATGTCAGCGAGGAAAATTCTATAGGAACCATCCAGAGCCCTGCCAATGTATGCTGTGTTCAGTTCAATCCTTACTCAAAACATCTTCTGTTTTTTGGATCAGCTGATTATAAGGTCTATGGTTATGATCTTCGTCAGACTAGGGTCCCTTGGTGCACATTATCAGGTCATGGAAAAGCGGTTAGCTATGTAAAATTCCTAGATGCCGAAACTGTTGTCTCTGCTTCCACTGATAACTCTTTGAAGCTCTGGGACCTGAAGAAAACCAGCTCTTCTGATGCTTGTAGCTTAACCTTTAAAGGTCATAGTAACGAAAAGAATTTCGTCGGTTTATCAGTTTTAGATGGATACATCGCATGTGGTTCAGAAACTAATGAGGTATACTGCTATCACAAATCTCTGCCAGTGCCAATCACTTCTCACAAATTTGAGTCCATCAACCCTATTTCTGGTCATTCAAATAGTGATGACAACAATGGACAGTTTGTTTCTAGCGTCTGCTGGAGAAAGAAGTCTAATGTGCTTGTTGCAGCTAACTCAATTGGAATTGTGAAACTACTGCAGATGGTCTGA 2961 0.3796 MSGNGRNGTEEHKRKANDCFLNQGGKQNIPKLPIKKNCPESLPNDNVNDSEHIVGEIHATTYKNPNPRQLQKNQLTIESRYNSLIREIEPKIEEQLPAKLSNRLEGVDSESWGMKTLSTLKVSANISKVDNIITSSNAHLIRSTTQQNSLTTYNFSQIILKQKLKGKGIVSKDLDKSTNLGGLLMGPEDENPSFEAMFQPGTLLRSNDDDDNRPFLQAIAKSGTESFTDGLNLREWLNFEGHKMSKSGSILIFKQIMELVDFAHSQGMVLQDLRPSCFTLSSSGKIKYIGSSGHLDLDKVMTYNVTRKRPMEHDICASQSLSTKLQKPCEDTRTVWQQQQHHFTGIHGCSTTTLNQTDPYMKRHIESRSKESLCHNGSNYQHTSTKEKQFTSVTMQLEEKWYCSPEELNDGVCTFSSNIYSLGVLLFELLCNIESWEVHSAVMSDLGHRILPPRFLSENSKEAGFCLWLLHPDPSSRPNTRMILESEFMHESEEANSGDDIAVSGEDEVETEQLLHFLSSLKDEKRKQAAKLAEELSCVDEDIKEIEKSYSFRTDSVFPLAKINYPSCSDVSRSIPSSSANESRFMSNINQLENSYFSTRFQVQLKEDSAVSSYDEDVLESRLRFPHVRNLNKEPKIIQSSVGRLGSFFEGLCKFSCYSKFEELGTLRNRDLLSSANVICALSFDRDEDYIAAAGVSKKIKIFDLSTILCDSVDIQYPVVEMSNKSKLSCVCWNSYIKNHLASTDYDGVVQMWDAGTGQPLSKYMEHQKRAWSVHFSLSDPKLFASGSDDCSVKLWNVSEENSIGTIQSPANVCCVQFNPYSKHLLFFGSADYKVYGYDLRQTRVPWCTLSGHGKAVSYVKFLDAETVVSASTDNSLKLWDLKKTSSSDACSLTFKGHSNEKNFVGLSVLDGYIACGSETNEVYCYHKSLPVPITSHKFESINPISGHSNSDDNNGQFVSSVCWRKKSNVLVAANSIGIVKLLQMV* 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0749 986 ProSiteProfiles Trp-Asp (WD) repeats profile. 764 806 IPR001680 GO:0005515
Lan2g0749 986 SUPERFAMILY WD40 repeat-like 676 982 IPR036322 GO:0005515
Lan2g0749 986 SUPERFAMILY Protein kinase-like (PK-like) 227 487 IPR011009 -
Lan2g0749 986 CDD WD40 670 982 - -
Lan2g0749 986 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 850 883 - -
Lan2g0749 986 SMART WD40_4 660 704 IPR001680 GO:0005515
Lan2g0749 986 SMART WD40_4 715 754 IPR001680 GO:0005515
Lan2g0749 986 SMART WD40_4 938 984 IPR001680 GO:0005515
Lan2g0749 986 SMART WD40_4 800 839 IPR001680 GO:0005515
Lan2g0749 986 SMART WD40_4 843 881 IPR001680 GO:0005515
Lan2g0749 986 SMART WD40_4 888 927 IPR001680 GO:0005515
Lan2g0749 986 SMART WD40_4 757 797 IPR001680 GO:0005515
Lan2g0749 986 MobiDBLite consensus disorder prediction 1 37 - -
Lan2g0749 986 Gene3D Transferase(Phosphotransferase) domain 1 230 498 - -
Lan2g0749 986 ProSiteProfiles Protein kinase domain profile. 144 489 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g0749 986 SMART serkin_6 144 489 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g0749 986 Pfam WD domain, G-beta repeat 849 881 IPR001680 GO:0005515
Lan2g0749 986 Pfam WD domain, G-beta repeat 758 797 IPR001680 GO:0005515
Lan2g0749 986 PANTHER PROTEIN SPA1-RELATED 2 3 47 IPR044630 GO:0009640
Lan2g0749 986 PANTHER PROTEIN SPA1-RELATED 2 49 986 IPR044630 GO:0009640
Lan2g0749 986 Gene3D - 648 986 IPR015943 GO:0005515
Lan2g0749 986 Coils Coil 522 549 - -
Lan2g0749 986 PRINTS G protein beta WD-40 repeat signature 741 755 IPR020472 -
Lan2g0749 986 PRINTS G protein beta WD-40 repeat signature 784 798 IPR020472 -
Lan2g0749 986 PRINTS G protein beta WD-40 repeat signature 868 882 IPR020472 -
Lan2g0749 986 PANTHER LIGASE COP1, PUTATIVE-RELATED 49 986 - -
Lan2g0749 986 PANTHER LIGASE COP1, PUTATIVE-RELATED 3 47 - -
Lan2g0749 986 ProSiteProfiles Trp-Asp (WD) repeats profile. 850 890 IPR001680 GO:0005515
Lan2g0749 986 ProSitePatterns Trp-Asp (WD) repeats signature. 868 882 IPR019775 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0749 Lan-Chr2 15875147 15881936 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0749 761 926 Miscellaneous Gene Families AT5G08390 26.190 2.25e-09 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_PEK Lan2g0749 WD40 0.0069 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0749 K16240 - gmx:100799267 1341.25