Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0745 ATGAAGCCTCTTTCTTCTCGTACCCCACACCCCATTTCCCCCTTCAAGCCCAAACACCTCGCCCTCAAAAACGCACCCTCTCGAAACCATCGACGCCGGTCTTCGAAGAAAGAAGCTCAACTCGTCAGCGGCTCAGTTAGCGAGTTAAGAACCGATTCACATCCCGTTCCAGTCAAGAGTGATGAATTTATCACTGAAGAAGATGAAGATGAAGATGAAGAGAGTGAAGGTATAATCGAGGAAGATGATGAGATATTGAATAAGAGTAAAACTGTTTTGGTTGAAAATGAGAAACCAACTCCAATTGCTTCTGTAACTGAGGCTTCTGATTCTCATTTGAGTAACACTAGATTCGACCAATGTTCAGTCTCCCAACTGTCATTAAAAGCAGTGAAGGATGCTGGGTATGAGAAAATGACTATTGTGCAGGAAGCAACTCTTCCAGAAATACTTAAAGGTAAGGATGTCCTCGCCAAGGCTAGAACGGGCACTGGAAAAACAGTAGCCTTTTTGCTTCCGTCAATTGAATTTGTTGCAAAATTACCGCCTAGTGATCGTGATCAAAGGCGGTCACCAATTCATGTTCTTGTCATATGCCCAACTAGAGAGCTTGCAAGTCAAGCTGCTGCAGAGGCCACTAAACTGCTGAAATATCATCCTACCATTGGTGTTCAAGTTGTGATTGGAGGGACAAAACTTGGTTTAGAACAGAAACGTATGGCAACAAAACCTTGCCAGATCCTTGTTGCTACACCTGGAAGGCTTAGAGATCATGTTCAGAATACTGCTGGTTTTGCAACTAGGCTAATGGGTGTGAAGATCTTGGTGCTTGATGAAGCTGATCTTTTACTAGACATGGGATTCCGCAAAGACATTGAGAAGATTATTGCAGCAACCCCTAAACAACGACAAACACTTATGTTTTCTGCCACCGTTCCTGAAGAGGTGCGTCAAATCTGTCATATTGCTTTGAGAAGGGATCATAAATATATCAATACAGTTCAAGAGGGCAGTGAGGAGACACATTCACGGGTTGGCCAGACACATTTAGTTGCCACATTAGACAAGCATTTCTCTATAGTCTATACTCTTCTGATGGAGCACATTGTAGATGACCTTGAATATAAGGTTCTTGTTTTCTGCACAACTGCTATGGTCACAAAACTGGTTGCTGAACTTCTTGCTAAGTTGAAGTTGAATGTAAGAGAAATCCATTCAAGAAAGCCTCAGAGTTATAGAACCAGAGTCTCTGAGGAGTTTAGGAAGTCAAAGCGTATCATTTTAGTTACTTCCGATGTATCTGCGCGTGGAGTTGATTACCCAGATGTCACCCTTGTTATACAGCTTGGTTTACCGGCCGATAAGGCACAGTATATACATCGACTGGGAAGAACAGGGCGGAGAGGTAAAGAAGGGAGGGGTGTATTGATACTGGCTCCTTGGGAGGAGTTCTTTTTACTTACCACCAAAGATTTGCCTATTGAGAAAGCTGCCGCACCTTTAGTTGATCCTGAATCTAAGAAAAAGGTGGAAAGAGCTCTGGCGCAAACGGAGATGAAGAGTAAAGAAGCAGCATATCAGGCATGGCTTGGTTACTACAATTCCAACAAGAAAGTGGGGAAAGACAAGCATAGGCTAGTAGAGCTTGCAAATGAGTTCAGTAGAAGCATGGGACTTGATACTCCTCCTGCTATACCTAAGCTAGTTCTTGGTAAGATGGGACTTAGAAATATCCCTGGTTTACGTGCCAAATAG 1755 0.4319 MKPLSSRTPHPISPFKPKHLALKNAPSRNHRRRSSKKEAQLVSGSVSELRTDSHPVPVKSDEFITEEDEDEDEESEGIIEEDDEILNKSKTVLVENEKPTPIASVTEASDSHLSNTRFDQCSVSQLSLKAVKDAGYEKMTIVQEATLPEILKGKDVLAKARTGTGKTVAFLLPSIEFVAKLPPSDRDQRRSPIHVLVICPTRELASQAAAEATKLLKYHPTIGVQVVIGGTKLGLEQKRMATKPCQILVATPGRLRDHVQNTAGFATRLMGVKILVLDEADLLLDMGFRKDIEKIIAATPKQRQTLMFSATVPEEVRQICHIALRRDHKYINTVQEGSEETHSRVGQTHLVATLDKHFSIVYTLLMEHIVDDLEYKVLVFCTTAMVTKLVAELLAKLKLNVREIHSRKPQSYRTRVSEEFRKSKRIILVTSDVSARGVDYPDVTLVIQLGLPADKAQYIHRLGRTGRRGKEGRGVLILAPWEEFFLLTTKDLPIEKAAAPLVDPESKKKVERALAQTEMKSKEAAYQAWLGYYNSNKKVGKDKHRLVELANEFSRSMGLDTPPAIPKLVLGKMGLRNIPGLRAK* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0745 584 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 193 485 IPR027417 -
Lan2g0745 584 MobiDBLite consensus disorder prediction 1 79 - -
Lan2g0745 584 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 147 330 IPR014001 -
Lan2g0745 584 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 25 80 582 - -
Lan2g0745 584 MobiDBLite consensus disorder prediction 63 79 - -
Lan2g0745 584 Gene3D - 339 562 IPR027417 -
Lan2g0745 584 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 365 515 IPR001650 -
Lan2g0745 584 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 116 144 IPR014014 GO:0003724
Lan2g0745 584 Pfam DEAD/DEAH box helicase 142 318 IPR011545 GO:0003676|GO:0005524
Lan2g0745 584 Pfam Helicase conserved C-terminal domain 370 469 IPR001650 -
Lan2g0745 584 PANTHER RNA HELICASE 80 582 - -
Lan2g0745 584 Gene3D - 63 331 IPR027417 -
Lan2g0745 584 CDD SF2_C_DEAD 347 478 - -
Lan2g0745 584 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 307 IPR027417 -
Lan2g0745 584 SMART helicmild6 388 469 IPR001650 -
Lan2g0745 584 CDD DEADc_MSS116 123 332 - -
Lan2g0745 584 SMART ultradead3 135 348 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0745 Lan-Chr2 15803977 15808306 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0745 105 497 Eukaryotic Initiation Factors Gene Family AT3G19760 27.139 2.93e-45 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0745 - - lang:109336771 1083.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0656 11 5466757 5482337 Lan2g0745 2 15803977 15808306 LSH