Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0738 ATGAAGATTGAGATGGGTTTAGGAGGTGGTGGGTTATGGAATGATGAAGAAAAAACCATGGTGGCTATGGTTCTAGGCACTCATGCTTTCGATTATTTGTTTACCAACTCTTTTTCAAATGAAAATCTGTTAATGACAATAGGAAGTGGTGAGAATCTGCAGAAGAAGCTCTCAGATCTTGTGGAACTTCCCAACATGTCAAATTTCAGCTGGAACTATGCAATTTTCTGGCAACTTTCACAGTCCAAATATGGAGACTTGGTTCTTGGTTGGGGTGATGGGTGTTGCAGGGAACCCAATGAAGGAGAAGGTGGCAGTGGTGGTGGAGTTAGAGGGACTCTGAGCCTTGGCATGAATGATGAGATGCAACAGAAGATAAGGAAGAGAGTGCTTCAGAAGCTGCACACAACTTTTGGTGATTCAGATGAAGAAAACTATGCTTTTGGATTAGACCATGTTACTGACACAGAGATGTTCTTTCTTGTGTCCATGTACTTCTCCTTCCCTCGTGGACATGGTGGTCCAGGTAAGTGCTTTGCATCAGGGAAACCCTTGTGGCTCATTGATGTTATGAAATCTAGTTCTGATGATTACTGTGTGAGATCTTTCTTGGCTAAATCGGCTGGAATTCAGACTATTGTTTTGGTACCTACTGATTTGGGTGTTTTGGAGTTAGGTTCTGTTAGGATAGTGAAGGAAGACTTTGATTTGTTGCATGCTGTGAAATCTGTGTTTTCAGCTCCATCATCATTCGCCATGTTTAGTAAGCCAATTTCGGCAAACTCTGAGAAAAGAGATGGTAATGCCCTTTTTCCTGGTTTAGGAACTGGGGATAGTAACAAAAGCAAGAGCATTAATAAAGTAGAGGCAAATGGAGCACTAAAAGTTTTTGGGCAAAATTTCAACACTTTGAATTCAGGTCATACGACTCATTTCAGGGAGAAACTTGCTGTTAGGAAAATGGAGAGGCCTCCTTGGAGAGGTCACCCTAATGGGAATAGAGGCATTGGCTTTCCGAATGTGCAAAATGGTATTCATGGTTCGAATTGGGGAGCTAGTACTCAAGGTGTGAGGCCGCCACCTAGCCCTGTGGAAACTCCTAGGTCTTCCACAAGGAATGTACCAGAGCTGGCAAATGGTGCAAGACATGATTTCATGCTTAACAACTGTCTTCCACCGCAACGGCTGGGGCAAATGCAAATTGATTTCTCAGGTGCCACTTCAAGGTCTAATGTGATTGCTGAATCTGAGCTTTCTGATGTTGAGGCATCATGCAAGGAGGGCAAGCCGAGTACAGCTGATGAGAGGAGGCCTAGGAAGCGAGGGAGGAAGCCTGCCAATGGAAGGGAAGAACCCCTGAATCACGTGGAAGCAGAGAGACAAAGGCGTGAGAAGCTGAACCAGCGGTTCTATGCGTTACGAGCTGTTGTTCCAAATATCTCCAAGATGGATAAGGCATCTCTTTTGGGAGATGCTATTGCTTACATCAATGAGCTTCAGGCAAAACTCAAGATCATGGAGTCTCAGAGAGGAGATAGGTTTGGAAGCACATCCATGGATAAATCGGCATCAGAGGCAGCCAACTCAAAAACAGAAACTTGTGACGTGGATATTGAAACTGTTCAAGATAGAGTCATTGTAAAGGTGAGCTGCCCTATTCATGATCACCCTGTATCAAAAGTGATTCAGGCATTCAAAGAAGCAGAAATCAGCGTTGTAGAGTCAAAACTCGCAGCTTCGAATGATACTGTCTTACATACATTCGTGATCAAGTCCCGAAGACCTGAACAGCTTACAAAGGAGAAGTTGATTGCAGTGTTTTCTGGAGAATCCAACTCCTTACAGCCGTTGTCATCGGTTAGTTAG 1866 0.4394 MKIEMGLGGGGLWNDEEKTMVAMVLGTHAFDYLFTNSFSNENLLMTIGSGENLQKKLSDLVELPNMSNFSWNYAIFWQLSQSKYGDLVLGWGDGCCREPNEGEGGSGGGVRGTLSLGMNDEMQQKIRKRVLQKLHTTFGDSDEENYAFGLDHVTDTEMFFLVSMYFSFPRGHGGPGKCFASGKPLWLIDVMKSSSDDYCVRSFLAKSAGIQTIVLVPTDLGVLELGSVRIVKEDFDLLHAVKSVFSAPSSFAMFSKPISANSEKRDGNALFPGLGTGDSNKSKSINKVEANGALKVFGQNFNTLNSGHTTHFREKLAVRKMERPPWRGHPNGNRGIGFPNVQNGIHGSNWGASTQGVRPPPSPVETPRSSTRNVPELANGARHDFMLNNCLPPQRLGQMQIDFSGATSRSNVIAESELSDVEASCKEGKPSTADERRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKIMESQRGDRFGSTSMDKSASEAANSKTETCDVDIETVQDRVIVKVSCPIHDHPVSKVIQAFKEAEISVVESKLAASNDTVLHTFVIKSRRPEQLTKEKLIAVFSGESNSLQPLSSVS* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0738 621 MobiDBLite consensus disorder prediction 340 375 - -
Lan2g0738 621 MobiDBLite consensus disorder prediction 415 461 - -
Lan2g0738 621 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 450 499 IPR011598 GO:0046983
Lan2g0738 621 PANTHER MYC 1 612 IPR045084 GO:0003700|GO:0006355
Lan2g0738 621 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 453 511 IPR036638 GO:0046983
Lan2g0738 621 Pfam Helix-loop-helix DNA-binding domain 454 500 IPR011598 GO:0046983
Lan2g0738 621 Gene3D - 443 512 IPR036638 GO:0046983
Lan2g0738 621 PANTHER ABA-INDUCIBLE BHLH-TYPE TRANSCRIPTION FACTOR 1 612 - -
Lan2g0738 621 CDD bHLH_AtAIB_like 447 527 - -
Lan2g0738 621 SMART finulus 456 505 IPR011598 GO:0046983
Lan2g0738 621 MobiDBLite consensus disorder prediction 420 461 - -
Lan2g0738 621 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 53 245 IPR025610 -
Lan2g0738 621 MobiDBLite consensus disorder prediction 340 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0738 Lan-Chr2 15637191 15642337 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0738 9 619 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G01260 50.466 0.0 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan2g0738 bHLH-MYC_N 1.4e-51 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0738 - - lang:109336709 1231.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0644 11 5369475 5372531 Lan2g0738 2 15637191 15642337 LSH
Lan4g0796 4 9984300 9986535 Lan2g0738 2 15637191 15642337 PCT
Lan2g0738 2 15637191 15642337 Lan4g0796 4 9984300 9986535 PCT