Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0737 ATGAAGCAGCAACAACAACCACTCTGCTCCGCCGCCGAAGATGACGTAACAGCTACAACAACTAAACCAGACAACTCAAGCGGCGGTGGCACGCGCCACCCAGTCTACCGCGGCGTCCGGAAACGGCGGTGGGGCAAATGGGTATCCGAAATTCGGGAACCACGCAAGAAGTCACGCATATGGCTTGGCTCCTTTCCGGTGCCGGAGATGGCGGCCAAGGCCTATGACGTCGCCGCCTACTGCCTGAAAGGTCGGAAGGCGCAGCTCAACTTCCCGGACGAGGTACACCACCTGCCACCCTTGCCACCGGCACCTGCATGCACCGCGAGGGACATCCAAGCGGCAGCGGCCAAGGCGGCTCACATGATGATGAAGGCTACGAGTTCTCCGGAGAAGAGTGGCATTGCTTCTTCTTCAGCCGGTGATGGAAATGGCGGCAGCGGCGATGACTTTTGGGCTGAGATAGAGTTGCCGGAGCTCATGAATAGCAAGTGGTGGAATCTTCTCAATAATTAA 516 0.5795 MKQQQQPLCSAAEDDVTATTTKPDNSSGGGTRHPVYRGVRKRRWGKWVSEIREPRKKSRIWLGSFPVPEMAAKAYDVAAYCLKGRKAQLNFPDEVHHLPPLPPAPACTARDIQAAAAKAAHMMMKATSSPEKSGIASSSAGDGNGGSGDDFWAEIELPELMNSKWWNLLNN* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0737 171 MobiDBLite consensus disorder prediction 126 148 - -
Lan2g0737 171 PRINTS Ethylene responsive element binding protein signature 36 47 IPR001471 GO:0003700|GO:0006355
Lan2g0737 171 PRINTS Ethylene responsive element binding protein signature 74 94 IPR001471 GO:0003700|GO:0006355
Lan2g0737 171 CDD AP2 36 93 IPR001471 GO:0003700|GO:0006355
Lan2g0737 171 SUPERFAMILY DNA-binding domain 35 94 IPR016177 GO:0003677
Lan2g0737 171 MobiDBLite consensus disorder prediction 1 37 - -
Lan2g0737 171 MobiDBLite consensus disorder prediction 1 28 - -
Lan2g0737 171 ProSiteProfiles AP2/ERF domain profile. 35 92 IPR001471 GO:0003700|GO:0006355
Lan2g0737 171 Gene3D AP2/ERF domain 35 93 IPR036955 GO:0003700|GO:0006355
Lan2g0737 171 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 4 167 - -
Lan2g0737 171 MobiDBLite consensus disorder prediction 130 144 - -
Lan2g0737 171 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 4 167 - -
Lan2g0737 171 SMART rav1_2 35 98 IPR001471 GO:0003700|GO:0006355
Lan2g0737 171 Pfam AP2 domain 34 84 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0737 Lan-Chr2 15545684 15546411 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0737 1 163 AP2-EREBP Transcription Factor Family AT1G01250 56.647 9.00e-52 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan2g0737 AP2 1.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0737 K09286 - gmx:100806544 221.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0643 11 5354903 5355606 Lan2g0737 2 15545684 15546411 LSH
Lan9g0985 9 16690506 16691211 Lan2g0737 2 15545684 15546411 LSH
Lan4g0798 4 10029644 10031103 Lan2g0737 2 15545684 15546411 PCT
Lan2g0737 2 15545684 15546411 Lan4g0798 4 10029644 10031103 PCT