Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0711 ATGGAATCTTGGAGCTGTGTTGAAGAAGAGAAAGGCTATTTGTTTTCTGATGAAATGGATTTTTCACTTGATGCTTTTATGAGAAGTAGAAAAGCATTGGTTGAATGGGACAACAAAGGGCCATGTAACTTTGAGGGAGATGGATTTGCTTCAGACAGAGAGATAGTTTGGGAATTTGTTGCAAAAGAAGGACAACAAAGCATGGAATTTGTGGACTTGGGATTTCCCGACTTGTTCCGAAAGTCCTTTAATAGTGGCCAGGCTCATGAGATATCTACCTGTGACTTAGATAGTAATTCTAGTAAAAGAGGGAATTCATCCACCCATGTTATTGCTTTGGTTTCGTCTTTGGGGGAAGAAGTATCCGAATCAAAGCATTTACGTTCTCTAGTTGAATCGAAAACTCACGGCTCTTCACTGATTGATTTGAAGCTAGGGAGTTTAGCAGATTACCGAGGTGCAAGCAATGATGAAATTGCAGAAGAAGGGTTTACTTTATCATCTATGCATCCAACCATGCTCACAAAGAGAGCTCGCACCTCAAGCTCGCCTATTCAGGCTCCGGTATGTCAAGTTTATGGTTGTAACGTGGATCTTAGCTCCTCAAAAGAGTACCACAAAAGGCATAAAGTTTGTGATGTTCACTCTAAGACAGCTAAAGTTATTGTTAATGGCATTGAACAGAGGTTTTGTCAGCAGTGCAGCAGGTTCCATTTGCTAGCTGAATTTGATGATGGTAAGCGCAGTTGTCGTAGGCGTCTAGAAGGACATAATGAACGCCGAAGGAAACAACAGTTTGATTACATGTCTAGTAAACAACACAAGATTCATCAGTCATTTCAAGGTACCGATTATTTGGGGTCTTCGTTACAGAAAAGATCTCAGTTTCCCTTTCAAGACATATTTAGGAGTGGCATCATTTTGTCAGGAAAGTATGACCAAATCTCTCATAGTGGACATGTCAAATTGGAACATGAATCAATCTACAGTTCTCAAGAAGCATTAGCTTTAAAGCATGGTCAGGAGTTATCAGGCTGTGCTCTCTCTCTTCTGTCAGCTCAGTCACAGAATCCGCCGCGCCATTCAACCGGAAATCTATCGCCTAGTTCCCTTATTTTTCAGAGCACCTGCTTGCAAAACAGAGATGATCAAGTTTCTGAAACACCATCAGGGATAAACTCTGTGGATAAATATGTACCAACTGAGTCCTTTCGATGTGGGATGAACTCTAAGGAAGACATAACAAGTGGGTCATCAATACTTTCTAATGATTATTGCCAGCCATCAGCCTCATGTAACGTCAAATATCGTCCTTCGTATGAACATGGAACAACGGTCGATCTGTTCCAATTGTCCTCAAATCTTCAAAGGGTGGAGCAGCAAAGAAATGGTTTGATAAAATGGGAAAATGATGATTTCTGTTTCCCAACTGTGTAA 1437 0.4085 MESWSCVEEEKGYLFSDEMDFSLDAFMRSRKALVEWDNKGPCNFEGDGFASDREIVWEFVAKEGQQSMEFVDLGFPDLFRKSFNSGQAHEISTCDLDSNSSKRGNSSTHVIALVSSLGEEVSESKHLRSLVESKTHGSSLIDLKLGSLADYRGASNDEIAEEGFTLSSMHPTMLTKRARTSSSPIQAPVCQVYGCNVDLSSSKEYHKRHKVCDVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRRRLEGHNERRRKQQFDYMSSKQHKIHQSFQGTDYLGSSLQKRSQFPFQDIFRSGIILSGKYDQISHSGHVKLEHESIYSSQEALALKHGQELSGCALSLLSAQSQNPPRHSTGNLSPSSLIFQSTCLQNRDDQVSETPSGINSVDKYVPTESFRCGMNSKEDITSGSSILSNDYCQPSASCNVKYRPSYEHGTTVDLFQLSSNLQRVEQQRNGLIKWENDDFCFPTV* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0711 478 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 59 460 - -
Lan2g0711 478 SUPERFAMILY SBT domain 188 269 IPR036893 GO:0003677|GO:0005634
Lan2g0711 478 Pfam SBP domain 190 264 IPR004333 GO:0003677
Lan2g0711 478 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 59 460 IPR044817 GO:0003677
Lan2g0711 478 Gene3D - 181 251 IPR036893 GO:0003677|GO:0005634
Lan2g0711 478 ProSiteProfiles Zinc finger SBP-type profile. 187 264 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0711 Lan-Chr2 14406552 14411829 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0711 104 476 SBP-box Gene Family AT1G69170 38.084 1.74e-56 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lan2g0711 SBP 3.7e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0711 - - gmx:100797372 619.002