Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0701 ATGATGCAAAAACAGGATATAGATATGGATCAAATTGTGGATGTTCCTGATACACCTGATAGGTTAACTACCAGGTATGGTGATCGGAAATATGTCGGTAAACCTGATGTGGATATCATGTGCATGAATAAGAGGGATAGGGGCTTTCTTGCTTCTGATGAAATTAATAACTGCAGCAATTATATAACATTGTCCTCATCAGAGAAATCTTGTCCTTCTCAAAATGCTCCTATGTTTAGGAGTGCACAAAGAGAGAAAATTTTAGGACGTGGGACAACACACTCTATTGTACCTGAAAAGATGGATAAAGGGAAAACTGCAATCTCTAACTCTCCTTGCAAATCATCTCACCATGGGCCTGTTTCTGTTTTACGTTTGAATGAAGAGAATGGAAAGTCCCAACAACTGAAATCAACTTTGTCACATCATGGATCAAGAAATAGCGCCACTGGAGACATGAAAGAGGTGAAAGCAAGCTTTGGGAATTCTTCATTACCATTCATTGCTGATTCCTCTAATGCATATGCCTTTAGAGGAAAGTGTAATAAAACCCTTTCAGGTCCTAATACATCGGTGGACCATGGCAAGAGCATTGCTCTGTCTAGTGATTCTCATTGTCCACAAAAAATTGAAAAGCAAGTGTCTTTGAATCCTCTTCTTTCATCTTCTCCTAGAGTTAGAGGGCAGAAGAGATTGGTACGAAATGGGTGCATTGCACCGCATAATATTGCAACAAGGGCAAAACAATCAACTGGACAGAACAGTCATCAACCCATTGACATTGAACAGAGTCATGCAGGGCATTCAGTTTCTAGCAAAATAAAATCTCCAATTAGTGTAGATGATATAGTTGCTGAAGAGAGAGACAGTGGTAGAGTGAAAGGAAAAGGAGTACTTATTCATCCTTCATCCCTTGGACTTAATGCTGGAACTATTCACACAGCGTGCAGTAGGTCTGCGATCTATTGTGAAGAGGTTGGTGGTACAAGTGATGCTCCAAGGAATTCAATTAAAAACTCTGAGGGGCAATGTGTTACAAATGATGGAAGATATATTAGCAGACAAAATAGGAACAGAATGGACAGAAGAGACACTAGGGGTGGTCAAAGCAACTATAGAGTATCTGGTTCTTTATTAGATCATACAGCTCAGGCAACTTCACTGGTCATTCCTGAGGCAAACCACTTGACTGGAAGACATCCTACAACAGATGTACTAACTAAAAGGCAAAGGAAACGTGGATCAGCTTCAGGAAGTCATAATGGCACATCTTTCGATTCAGAAATTATGTTCCTTGGTTCATCTGGGGAATCATCAAGATCATCCCACAGACCTGTCTTGAGTTCTGAGGTGGTCGAGTTGTTATCTGAACCAAGGTCCACCAACAGGATTTCCTTAGATTTATTTGACAATGACAACAATAGCTCAGATGCTCGGGCCCAACAAGTGGAAGCAGATGAGATATTGGCACGTGAACTCCAAGAACAACTGTATCGTGATGATTCTTTTGAAGGCAGAGGGATGCGGGTGCCAAGGGAGCCTTCAAATAGGCAGCCTCGTCCACGGACTCGTCAAAATCCTTCAAACAGGAGGAGAGCTGTGCCTCAAGTTTCTTTGGCTAATAGAACTTCACAGTTGAGGAATCGCACTATAAGACGGTCTCTTACACCTCACATATCAACTAGAGGAAGATATCCTCCATTTCCTCTAGATATGGACCTAGACATGAGACTCAATATATTGGAAGCATTAGAGGATTCAGTGGGCGGTCTTGGTGATATTGGAATGGCTGATGATATCTTTCATGTAGGACGTGATTTCAATGAAGAAGATTATGAAATGTTATTAGCTCTTGATGAAGGAAATCACCGGCATACTGGTGCAGCTTCCAATCAGATCAATGGCTTGCCACAGTCCACCATCCAGACTGACAACTTCACAGAGGTATGTGCTGTATGCCTCGACACCCCGGTGAAGGGAGAAACTATTCGGCACCTTCCTTGTTTGCACAAATTTCACAAAGATTGTATCGATCCGTGGCTCCGCAGGAAACCGTCATGTCCAGTGTGCAAGTCATCTATCACCTAA 2088 0.4205 MMQKQDIDMDQIVDVPDTPDRLTTRYGDRKYVGKPDVDIMCMNKRDRGFLASDEINNCSNYITLSSSEKSCPSQNAPMFRSAQREKILGRGTTHSIVPEKMDKGKTAISNSPCKSSHHGPVSVLRLNEENGKSQQLKSTLSHHGSRNSATGDMKEVKASFGNSSLPFIADSSNAYAFRGKCNKTLSGPNTSVDHGKSIALSSDSHCPQKIEKQVSLNPLLSSSPRVRGQKRLVRNGCIAPHNIATRAKQSTGQNSHQPIDIEQSHAGHSVSSKIKSPISVDDIVAEERDSGRVKGKGVLIHPSSLGLNAGTIHTACSRSAIYCEEVGGTSDAPRNSIKNSEGQCVTNDGRYISRQNRNRMDRRDTRGGQSNYRVSGSLLDHTAQATSLVIPEANHLTGRHPTTDVLTKRQRKRGSASGSHNGTSFDSEIMFLGSSGESSRSSHRPVLSSEVVELLSEPRSTNRISLDLFDNDNNSSDARAQQVEADEILARELQEQLYRDDSFEGRGMRVPREPSNRQPRPRTRQNPSNRRRAVPQVSLANRTSQLRNRTIRRSLTPHISTRGRYPPFPLDMDLDMRLNILEALEDSVGGLGDIGMADDIFHVGRDFNEEDYEMLLALDEGNHRHTGAASNQINGLPQSTIQTDNFTEVCAVCLDTPVKGETIRHLPCLHKFHKDCIDPWLRRKPSCPVCKSSIT* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0701 695 MobiDBLite consensus disorder prediction 395 429 - -
Lan2g0701 695 MobiDBLite consensus disorder prediction 354 368 - -
Lan2g0701 695 CDD RING-H2_PA-TM-RING 649 691 - -
Lan2g0701 695 ProSiteProfiles Zinc finger RING-type profile. 650 691 IPR001841 -
Lan2g0701 695 MobiDBLite consensus disorder prediction 129 151 - -
Lan2g0701 695 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 617 695 IPR013083 -
Lan2g0701 695 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 576 693 - -
Lan2g0701 695 MobiDBLite consensus disorder prediction 499 536 - -
Lan2g0701 695 SUPERFAMILY RING/U-box 649 694 - -
Lan2g0701 695 SMART ring_2 650 690 IPR001841 -
Lan2g0701 695 MobiDBLite consensus disorder prediction 499 519 - -
Lan2g0701 695 MobiDBLite consensus disorder prediction 129 147 - -
Lan2g0701 695 Pfam Ring finger domain 650 691 IPR001841 -
Lan2g0701 695 MobiDBLite consensus disorder prediction 520 536 - -
Lan2g0701 695 MobiDBLite consensus disorder prediction 1 21 - -
Lan2g0701 695 MobiDBLite consensus disorder prediction 330 374 - -
Lan2g0701 695 MobiDBLite consensus disorder prediction 332 353 - -
Lan2g0701 695 PANTHER - 576 693 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0701 Lan-Chr2 13987294 13994994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0701 472 695 C3H Transcription Factor Family AT1G04790 46.875 2.98e-62 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0701 - - lang:109336293 1353.19