Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0699 ATGCCTCCTCCACCATCTGCTTCACATTCACATGCATCTCCATATTCCACACCCTCAATGGTAAGATATACCAACAAAGAAGAAGGGGAAGGAAACAATGCAAGTCGCCATGCATGTGCTGCTTGTAGGCATCTAAAGAAAAAGTGCAATAAAGATTGTGTTCTTGCCCCTTATTTTCCTACGAAAAAGATCAAACAGTACTTTGTAGTGCACAAGGTTTTTGGGTACAACATCATGACCAAGATGCTTAGCAATCTTGTTGAGCAAGAAAGAAATGAAGCAGTTGAATCTTTCCAATGGGAAGCTATGATGTGGCAGCAAGATCCTGTGCATGGACCCCTTGGTGCATACAAGAAAGTGTGTGACATGAATAGAGTCTTATTGACCCAACAAGCAATTCAAAGTTTTGAAGCAGTTGATATGATAACACTGCACTAA 438 0.4087 MPPPPSASHSHASPYSTPSMVRYTNKEEGEGNNASRHACAACRHLKKKCNKDCVLAPYFPTKKIKQYFVVHKVFGYNIMTKMLSNLVEQERNEAVESFQWEAMMWQQDPVHGPLGAYKKVCDMNRVLLTQQAIQSFEAVDMITLH* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0699 145 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 31 126 - -
Lan2g0699 145 PANTHER LOB DOMAIN-CONTAINING PROTEIN 2 31 126 - -
Lan2g0699 145 ProSiteProfiles LOB domain profile. 37 138 IPR004883 -
Lan2g0699 145 Pfam Lateral organ boundaries (LOB) domain 38 123 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0699 Lan-Chr2 13792157 13792594 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0699 37 122 AS2 family AT1G06280 45.349 1.30e-27 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan2g0699 LOB 4.9e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0699 - - lang:109327103 295.049