Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0691 ATGGCTTCTGAGGCAGAGGTTTCTGAAATCACCTCTTTGTTTGAAAGGTTAGTGAGAAACAGAGACATGTCTCTGTTCTTGCCTTTCATATTTGGCTTCTCAGAATCATCATCAAGGGAAAATAGTGATGGCCCAGATCAGGAAACTGAGGATACTGAAGGTTCCCAGAGTCAAAGAATCATCTTGGTGAACCCTTTTACACAGGGCATGGTGGTGATTGATGGTGCTTCAAGTCTTGAGAATCTGTTTCATGAACTAGGAAGTAGCAAAAGTGGGCACCCACCAGCTTCAAAGGATTCAATTGAGGCCATGGATAATGTGGAAATTAGAGAAAGTGATGATCTTGGGGAGTGTGTAGTTTGTTTGGAAGAATTTGAGGTTGGTGGGGTGGCAAAAGTTATGCCTTGTAAGCATAAATTTCACTCCAATTGCATTGAAAAGTGGCTTGGAGTTCATGGGAATTGCCCTGTTTGTAGGTATGAGATGCCTGTTGAGGAGAAAGATGGAGGCAGGAAAAGTGAGGAGGAAAGGGGTGAGAGAAGAAGGATTGGTGGTGGTGAAGTTTGGGTTAGTTTTTCTGTTAATAGAGGTAGTAGAAGAAGCCAAGATGCAAATCAAGCCCCTTCTCGTGATTCCAGTGATAATTCTTCAAGTCCTAGTGGTGATGCTGAGGTAGAGAATTAG 684 0.4298 MASEAEVSEITSLFERLVRNRDMSLFLPFIFGFSESSSRENSDGPDQETEDTEGSQSQRIILVNPFTQGMVVIDGASSLENLFHELGSSKSGHPPASKDSIEAMDNVEIRESDDLGECVVCLEEFEVGGVAKVMPCKHKFHSNCIEKWLGVHGNCPVCRYEMPVEEKDGGRKSEEERGERRRIGGGEVWVSFSVNRGSRRSQDANQAPSRDSSDNSSSPSGDAEVEN* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0691 227 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 82 165 IPR013083 -
Lan2g0691 227 MobiDBLite consensus disorder prediction 35 58 - -
Lan2g0691 227 MobiDBLite consensus disorder prediction 165 184 - -
Lan2g0691 227 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 9 173 - -
Lan2g0691 227 SMART ring_2 118 158 IPR001841 -
Lan2g0691 227 SUPERFAMILY RING/U-box 102 164 - -
Lan2g0691 227 MobiDBLite consensus disorder prediction 193 227 - -
Lan2g0691 227 PANTHER - 9 173 - -
Lan2g0691 227 ProSiteProfiles Zinc finger RING-type profile. 118 159 IPR001841 -
Lan2g0691 227 CDD RING-H2_PA-TM-RING 117 159 - -
Lan2g0691 227 MobiDBLite consensus disorder prediction 194 227 - -
Lan2g0691 227 Pfam Ring finger domain 117 159 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0691 Lan-Chr2 13254414 13255402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0691 1 199 C3H Transcription Factor Family AT1G26800 50.739 4.33e-60 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0691 - - lang:109356689 344.354