Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0688 ATGAGCGATCATTTGGTGCTCGTCGTTGACCGTCTCACGTGCCCTGTCCCCGTTGACGCCGTTGCGCAACCCTCTCAGATCCATTCCGACCCTTCGTCCTCTCCGTCGACGGTGAATCATGCCGATGAAGGTGGGTCGGAGCATGGTGAGGGTGGCGATGAGGAGGAGCCACTGATCCAGATGGCCGAGTGCCGCATTTGTCAGGAGGAGGACGGAGTTTCCAATTTGGAGAGCCCCTGCGCCTGCAGCGGCAGTCTCAAGTATGCTCATAGAAAGTGTGTCCAGCATTGGTGCAATGAGAAAGGAGACATTACTTGTGAGATATGTCATCAGCCTTATCAATCTGGTTATACTGCCCCACCACCTCGTTCTAATCCTGATGAAACTACCATTGATATAGGAGGAGGCTGGACAATATCTGGCACACCTTTGGACTTGCGTGATCCACGACTCTTGGCGATAGCAGAGGCAGAACGTCAATTCTTGGACGCTGAATATGATGAATATGCTGCTTCTAATGCCAGCGGAGCTGCATTTTGCCGCTCAGTTGCTCTAATTTTAATGGCCCTTTTACTCTTGCGGCATGGACTCTCTGCCACAGATGGTGATGCTTCTGATGATGATCCATCCAATTTTTTCTCTCTTTTCTTGCTTCGAGCTGCTGGATTTCTTTTACCTTGCTATATTATGGCTTGGGCAATCAGTATCCTGCAACGTCGGCGACAAAGACAAGAGGCTGAAGCTCTAGCAGCAACACAAGTTGCCTTTGTTCTACAATCAGGGCAGCGTAGGGGTGTGCAATTTGCAATAGCACCAGGACCCACAGTGCACCCTGAACAAGTGTAG 846 0.5059 MSDHLVLVVDRLTCPVPVDAVAQPSQIHSDPSSSPSTVNHADEGGSEHGEGGDEEEPLIQMAECRICQEEDGVSNLESPCACSGSLKYAHRKCVQHWCNEKGDITCEICHQPYQSGYTAPPPRSNPDETTIDIGGGWTISGTPLDLRDPRLLAIAEAERQFLDAEYDEYAASNASGAAFCRSVALILMALLLLRHGLSATDGDASDDDPSNFFSLFLLRAAGFLLPCYIMAWAISILQRRRQRQEAEALAATQVAFVLQSGQRRGVQFAIAPGPTVHPEQV* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0688 281 CDD RING_CH-C4HC3_MARCH 64 110 - -
Lan2g0688 281 Pfam Protein of unknown function (DUF3675) 116 234 IPR022143 -
Lan2g0688 281 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 51 120 IPR013083 -
Lan2g0688 281 Coils Coil 152 172 - -
Lan2g0688 281 Pfam RING-variant domain 64 109 IPR011016 GO:0008270
Lan2g0688 281 ProSiteProfiles Zinc finger RING-CH-type profile. 56 116 IPR011016 GO:0008270
Lan2g0688 281 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 1 272 IPR033275 -
Lan2g0688 281 SMART ringv_2 63 110 IPR011016 GO:0008270
Lan2g0688 281 MobiDBLite consensus disorder prediction 25 41 - -
Lan2g0688 281 MobiDBLite consensus disorder prediction 23 55 - -
Lan2g0688 281 SUPERFAMILY RING/U-box 62 114 - -
Lan2g0688 281 PANTHER E3 UBIQUITIN-PROTEIN LIGASE MARCH-RELATED 1 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0688 Lan-Chr2 13194824 13198996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0688 63 139 C3H Transcription Factor Family AT2G37950 35.955 9.34e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0688 - - lang:109359054 462.225