Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0673 ATGTCTAGCAGAAGATCTCGTTCGAGACAATCTGGTGCTTCAGCTGATATCACTGATGCTCAAATCACCGATCTTGTTTCCAAGTTACAACAACTTATCCCTGAGCTTCGTGCTAGGCAAAGGCGCTCTGACAAGGTTTCCTCTGCTAAGGTATTGCAAGAGACTTGCAACTACATCCAGAACTTGCACAGAGAGGTCGATGATCTAAGTGACCGATTGTCACTACTTTTGGCCAACACAGACTCCAATAGTGCTCAAGCAGCCATTATTAGGAGCATACTTATGTAA 288 0.4444 MSSRRSRSRQSGASADITDAQITDLVSKLQQLIPELRARQRRSDKVSSAKVLQETCNYIQNLHREVDDLSDRLSLLLANTDSNSAQAAIIRSILM* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0673 95 Coils Coil 59 79 - -
Lan2g0673 95 Gene3D - 20 91 IPR036638 GO:0046983
Lan2g0673 95 PANTHER TRANSCRIPTION FACTOR PRE 1 95 IPR044293 GO:0006355|GO:0040008|GO:0046983
Lan2g0673 95 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 21 83 IPR036638 GO:0046983
Lan2g0673 95 Pfam Helix-loop-helix DNA-binding domain 21 62 IPR011598 GO:0046983
Lan2g0673 95 PANTHER TRANSCRIPTION FACTOR PRE6 1 95 - -
Lan2g0673 95 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 6 62 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0673 Lan-Chr2 12554225 12556001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0673 1 95 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47710 68.421 2.02e-35 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan2g0673 HLH 6.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0673 - - gmx:100816720 150.214