Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0672 ATGAATATGGCTTTCTTCCCACCAAATTTCATGCTACAAACCCCTGACAATGATGATCAGCAACCTCCACCTTCACTCAGCTCAATGTTAACAACATGTACGCCTCATGATTATCATGGGGTGGCATCTTTTCTAGGGAAGAGATCCATGTCATTTTCAGGGATTGAAGTTGCAGAAAAAGTTACTGCTGAGGAAGATTTTTCAGATGATGGATCACAAAGAGGGGAAAAGAAAAGGAGGCTTAACATAGAACAAGTGAAGACACTTGAGAAGAGTTTTGAGCTTGGAAACAAGCTTGAGCCTGACAGAAAAATGCGCCTGGCAAAGGTTCTTGGATTGCAGCCAAGGCAGATTACTATTTGGTTCCAGAACAGGAGGGCTAGGTGGAAGACCAAGCAGTTGGAGAAAGACTATGATGTTCTTAAAAGAAAGTATGATGCTATGAAATCAGATAATGATGCACTTCAATCTCAGAACCAAAAACTTGAAGATGAGATATTGACACTGAAAAGTAGAGAGCCAACTGAATCTATCAACCTGAATAAAGAAACAGAAGGGTCATGCAGTAATAGGAGTGAGAACAGCTCAGACATCAAGTTAGATATCTCAGCAAAGACACCAACTATTGACAGTCCTCTATCCCCACATCTCAAAAGAAGACCTTTCTTTCTATCATCCTCAGCTTCTAGACCTACAGCAGTGACTAAGTTTTACCAAATTGCTTCAAATTCTGTCTTCCAGTGCCAAAAGATTGATCAAGTTGCTAAAGAAGAGAACTTAAGCAACATGTTTTGTGGCATGGATGACCAATCTGGGTTCTGGCCAATGTTGGAGCAGCAACATTTCAATTGA 852 0.4061 MNMAFFPPNFMLQTPDNDDQQPPPSLSSMLTTCTPHDYHGVASFLGKRSMSFSGIEVAEKVTAEEDFSDDGSQRGEKKRRLNIEQVKTLEKSFELGNKLEPDRKMRLAKVLGLQPRQITIWFQNRRARWKTKQLEKDYDVLKRKYDAMKSDNDALQSQNQKLEDEILTLKSREPTESINLNKETEGSCSNRSENSSDIKLDISAKTPTIDSPLSPHLKRRPFFLSSSASRPTAVTKFYQIASNSVFQCQKIDQVAKEENLSNMFCGMDDQSGFWPMLEQQHFN* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0672 283 MobiDBLite consensus disorder prediction 1 25 - -
Lan2g0672 283 MobiDBLite consensus disorder prediction 180 201 - -
Lan2g0672 283 SUPERFAMILY Homeodomain-like 68 134 IPR009057 -
Lan2g0672 283 Coils Coil 124 172 - -
Lan2g0672 283 ProSitePatterns 'Homeobox' domain signature. 107 130 IPR017970 GO:0000981|GO:0006355
Lan2g0672 283 Gene3D - 69 138 - -
Lan2g0672 283 SMART HOX_1 75 136 IPR001356 GO:0003677
Lan2g0672 283 Pfam Homeodomain 77 130 IPR001356 GO:0003677
Lan2g0672 283 MobiDBLite consensus disorder prediction 173 201 - -
Lan2g0672 283 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 3 283 IPR045224 GO:0003700
Lan2g0672 283 PRINTS Lambda-repressor HTH signature 103 112 IPR000047 GO:0003677
Lan2g0672 283 PRINTS Lambda-repressor HTH signature 112 128 IPR000047 GO:0003677
Lan2g0672 283 CDD homeodomain 77 133 IPR001356 GO:0003677
Lan2g0672 283 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-13 3 283 - -
Lan2g0672 283 Pfam Homeobox associated leucine zipper 132 172 IPR003106 GO:0006355|GO:0043565
Lan2g0672 283 ProSiteProfiles 'Homeobox' domain profile. 72 132 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0672 Lan-Chr2 12492041 12493993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0672 3 283 Homeobox Transcription Factor Family AT1G69780 59.661 9.16e-112 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lan2g0672 Homeodomain 8.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0672 K09338 - gmx:100814080 402.519