Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0669 ATGCAAGATATGAAGAAGAATCAGCAGAAACAAGTGGTGGCCAATGAAGATTCTGATAAGAAGGAGCGTCGTCACATTGTAACATGGACTCAAGAGGAGGATGATATATTAAGGAAGCAGATTGGCACTTATGGAACAGTAAATTGGGCAATTATTGCTTCTAAATTCAAAGATAAAACTACAAGGCAGTGTAGAAGAAGATGGTACACTTATTTGAATTCTGATTTCAAGAAAGGAGGATGGTCACCTGAAGAAGACAAGCTCTTATGTGAGGCTCAAAAAATATTTGGTAATAGGTGGACAGAAATAGCAAAGGTGGTTTCAGGCAGAACTGATAATGCTGTGAAAAATCGTTTTTCCACATTGGGCAAAAAGAAAGCAAAATATGAAGCCTTGGCTAAAGAGAACAACTCTTCATACATCAATTCAGATAACAAGAGGGTTATTTTAGAACATGAGTGTAACACAGATACAACATCAGAGTCTGCAGTAGCTAATAAGAAGACTAGGAGATCCCATATCCCTGATGATGGTGCAGAAAAGATCAGTTTCGGTGGCAAATCACATAAAGAAAATGGAACTCCATTAAATCAGCAACCAAGAGTACCATTTGCAGTGTTACCTCAAAACTCTCATAATTTTAACATCTTGTCAGCTCAAAACAAGATTCAAGGAACATTCCTTAAAAAGGATGACCCAAAGATAAGTGCATTGATGCAACAAGCAGAATTACTAAGTTCACTGGCTCTAAAAGTTGATGCAAAGAGCATGGACCAAAGTCTTGAAAACGCATGGAAGGTTCTTCAAGAATTTCTGAATCAAACCAAAAAATCAGACATTTCCAGATATAAGATTCCAGATTTACAGCTTTTAGATCTTAAAGATTTGTTGGAGGACTTAAAGGGTAGTAGTGATGGGATCCAGCCATGTTGGAGGCAAATGGAACTATATGAAGACTCTCCAGGCAGTTCCGAATACAGTACAGGATCAACTCTTCTGTCTAATTCAGCAAGTGAGAATTTCGAAAACTCGCGGCATCAAGAAATTGGAACTGAACTGAAGTCTATTCAGATTGGAGATGGAGATGAAGGAGTTAGAGGATGTGACCAAGGGGTTCTTTCTAGTCCAACATTGAATAAAACAGTTATATTTCCTTCTTGTGAGGAGCAGATAGAGAAAGATGGCATTGCTTCTGCCTTATCAAGTGCAGGTTTCAATTCCCCTCTTCAAGCCACCCCTCTCTTCAAATCCTTAACTACAGGAATTCCTAGTCCACAATTTTCAGAAAGTGAAAGGAACTTCCTTATGAAAACACTTGGAATGGAGTCTCCATCCCTCAACCTAAGTGCCAAAACCTCACAACCACCACTCTGCAAAAGAACCCTACTACATAGCTTATAA 1401 0.3869 MQDMKKNQQKQVVANEDSDKKERRHIVTWTQEEDDILRKQIGTYGTVNWAIIASKFKDKTTRQCRRRWYTYLNSDFKKGGWSPEEDKLLCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFSTLGKKKAKYEALAKENNSSYINSDNKRVILEHECNTDTTSESAVANKKTRRSHIPDDGAEKISFGGKSHKENGTPLNQQPRVPFAVLPQNSHNFNILSAQNKIQGTFLKKDDPKISALMQQAELLSSLALKVDAKSMDQSLENAWKVLQEFLNQTKKSDISRYKIPDLQLLDLKDLLEDLKGSSDGIQPCWRQMELYEDSPGSSEYSTGSTLLSNSASENFENSRHQEIGTELKSIQIGDGDEGVRGCDQGVLSSPTLNKTVIFPSCEEQIEKDGIASALSSAGFNSPLQATPLFKSLTTGIPSPQFSESERNFLMKTLGMESPSLNLSAKTSQPPLCKRTLLHSL* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0669 466 Pfam Myb-like DNA-binding domain 29 89 - -
Lan2g0669 466 CDD SANT 81 122 IPR001005 -
Lan2g0669 466 MobiDBLite consensus disorder prediction 160 181 - -
Lan2g0669 466 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 72 IPR017930 -
Lan2g0669 466 SMART sant 77 125 IPR001005 -
Lan2g0669 466 SMART sant 25 74 IPR001005 -
Lan2g0669 466 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 73 127 IPR017930 -
Lan2g0669 466 PANTHER TRANSCRIPTION FACTOR MYB88 10 463 - -
Lan2g0669 466 Gene3D - 80 150 - -
Lan2g0669 466 ProSiteProfiles Myb-like domain profile. 73 123 IPR001005 -
Lan2g0669 466 MobiDBLite consensus disorder prediction 164 181 - -
Lan2g0669 466 CDD SANT 28 72 IPR001005 -
Lan2g0669 466 Gene3D - 18 77 - -
Lan2g0669 466 PANTHER MYB PROTEIN-RELATED 10 463 - -
Lan2g0669 466 ProSiteProfiles Myb-like domain profile. 29 72 IPR001005 -
Lan2g0669 466 SUPERFAMILY Homeodomain-like 24 119 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0669 Lan-Chr2 12259982 12266162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0669 12 312 MYB Transcription Factor Family AT2G02820 59.119 3.05e-124 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan2g0669 Myb_DNA-bind_6 2.7e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0669 K09422 - gmx:100807667 671.389